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cn_combo_scaffold_13776_11

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(7228..7965)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP60_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 245.0
  • Bit_score: 357
  • Evalue 1.30e-95
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 245.0
  • Bit_score: 357
  • Evalue 3.70e-96
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEA23326.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 245.0
  • Bit_score: 357
  • Evalue 1.80e-95

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGTCGTCGCCGCGGTCGAGGCCGTCCGCTCGCACGGGGCCGGCGTGTCCGTCGCCGACATCGCCTCGCGGGCCGGCATCACCAAGCCCGTGCTCTACCGCTACTTCGACGACCGCGCCGACCTGCAGCGCGCCGTCGGACAGCACGCCGTCGAGATGCTGATGGAACGCATGATCCCGGCGATGTCGGCCGAGCTGGAGCCCCGCGCACAGGTCGCGGCCGTCGTCGACGCGTTCCTCGCCGGCATCGAGGACGAGCCCCAGCTGTGGCGGTTCGTCGTGCACAACCCCACCGGTGGCACGGCCGAGCGCGAGGCCGGCGCCGAGATCGTCGACGACGCCCGCGAGCAGATCGCGCGGCTGCTCGCGATGCTCATCGGCGAACGGCTGCGCGCCGCGGGCCGCGACTCCGGCGGCGCGGAGGTGTGGGCGCACGGGCTCGTCGGCATGGTGCAGAACGCCGGCGACTGGTGGCTGGAGCGCCGCACGATGAGCCGCGCGACCGTCACCGACTACCTCACGGGCCTCATCTGGGGCGGCATCTCGGCCACGCTCGAGGGCCCGTCCCGCACAGCCGGACACGAGCCCCCCGAAAAACACCCGACGGGAAACACTGTTTCCCCGGAAAACGAGTCACCTGGTGCGGACACGGGCGACGACGCCCGCCGGGACCCACGCCCCGGCACCACGGCCCTGCGCGCCGTTCCCGACCCGCCCGCTGCCGGAGAGGCCCGATGA
PROTEIN sequence
Length: 246
MVVAAVEAVRSHGAGVSVADIASRAGITKPVLYRYFDDRADLQRAVGQHAVEMLMERMIPAMSAELEPRAQVAAVVDAFLAGIEDEPQLWRFVVHNPTGGTAEREAGAEIVDDAREQIARLLAMLIGERLRAAGRDSGGAEVWAHGLVGMVQNAGDWWLERRTMSRATVTDYLTGLIWGGISATLEGPSRTAGHEPPEKHPTGNTVSPENESPGADTGDDARRDPRPGTTALRAVPDPPAAGEAR*