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cn_combo_scaffold_15174_2

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 586..1308

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXL1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 240.0
  • Bit_score: 450
  • Evalue 8.60e-124
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 240.0
  • Bit_score: 450
  • Evalue 2.40e-124
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 240.0
  • Bit_score: 450
  • Evalue 1.20e-123

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAAGCGCAGCAAGAACTACCGCAAGGCCGCAGAGCTGATCGACAGCGACCGGCTCTACACCCCGCTCGAGGCCGCCGGCCTGGCCAAGGAGACCTCCGCCGAGTCCAAGCAGGACCCGACGGTCGAGGTCGCCATGCGCCTGGGCGTCGACCCCCGCAAGGCCGACCAGATGGTCCGCGGGACCGTGAACCTGCCGCACGGTACCGGTAAGACCGCCCGGGTCATCGTCTTCGCCTCCGGCGACAAGGCCACCGAGGCCGAGGCCGCCGGCGCCGACGTCGTGGGCGCCGAGGACCTGATCGAGCGCATCCAGGGCGGCTGGCTGGAGTTCGACGCGGCCATCGCCGCGCCGGACCAGATGGCCAAGGTCGGTCGCATCGCCCGCATCCTGGGCCCGCGTGGCCTGATGCCCAACCCGAAGACCGGCACCGTCACCCCGGACGTCGCCAAGGCCGTCAACGAGATCAAGGGCGGTAAGATCAACTTCCGGGTCGACAAGCAGGCCAACCTGCACCTGGTCATCGGCAAGGCGTCGTTCGACGCCGAGAAGCTGGTCGAGAACTACGGCGCCGTGCTGGATGAGATCCTGCGCGCCAAGCCGTCGGCCGCCAAGGGCCGGTACATCAAGAAGATCACCGTCTCCACCACCTCGGGCCCCGGAATCCAGGTCGACCCGAACCGTACGCGCAACCTCCTCGTCGACGACGCTCCCAGCGCCTGA
PROTEIN sequence
Length: 241
MKRSKNYRKAAELIDSDRLYTPLEAAGLAKETSAESKQDPTVEVAMRLGVDPRKADQMVRGTVNLPHGTGKTARVIVFASGDKATEAEAAGADVVGAEDLIERIQGGWLEFDAAIAAPDQMAKVGRIARILGPRGLMPNPKTGTVTPDVAKAVNEIKGGKINFRVDKQANLHLVIGKASFDAEKLVENYGAVLDEILRAKPSAAKGRYIKKITVSTTSGPGIQVDPNRTRNLLVDDAPSA*