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cn_combo_scaffold_15462_7

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4519..5451)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Psed_0327 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQK2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 316.0
  • Bit_score: 517
  • Evalue 1.30e-143
Ku protein similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 316.0
  • Bit_score: 517
  • Evalue 3.50e-144
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 316.0
  • Bit_score: 517
  • Evalue 1.80e-143

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
AGCGTGCCCGTCAAGCTGTACTCCGCGACGACCAACCACGACATCCGGTTCCATCAGGTGCACGCCACGGACGGTGGTCGGATCCGCTACAAGCGGACCTGTTCGATCGACGGCGAGGAGGTGGAGTACGCCGACATCGTCAAGGGCTTCGAGACCGAGGACGGCGAGCTGATCACCCTCGACGAGGGCGACCTCGACTCGCTGCCGGTGGCGACGGGCCACGAGATCGACGTCATCGAGTTCGTGCCGTCCGACCAGATCGACCCGCTGCTGTTCGACAAGAGCTACTACCTCGAGCCGGAGACGAAGGCCGCCAAGCCCTACGCGCTGCTGCGCGAGGCGTTGACCGACACCGACCGCATGGCCGTCGTGAAGGTGGCACTGCGGCAGCGCGAGACGCTGGCGCTGCTGCGCGTGCGCGGCAAGGCCATCGTTCTGCAGACGATGCTGTGGCCCGACGAGGTCCGCGAGCCGGAGTTCGACATCCTCGACGTCGAGGTGGAGCTGCGTCCGCAGGAGCTGCAGATGGCGGCCTCGCTCGTGGAGAGCCTGGGTGCCGACTTCGAGCCGTCGGACTTCCACGACGAGTACCGCGACGCCGTCGCCGACATGATCGAGCGCAAGCGCACCAGCGGCGACAGCCGTCCGGCGCCGGCGCCGGAGAAGCCCGCCGACGACGGCGACAGCATGACCGACCTGCTGACGGCGTTGCAGCGCAGCGTCGAGGCGGCCCGCGGGACGTCGGGCAAGGCGCCCGAGAAGCCTGCCGAGGAGAAGCCAGCGGCTGCCAAGGCCGACGACGCCGCCGAGGAAAAGGCCGAGGAGAAGGCCGAGAAGCCCAAGCCTCGCCGGCGCACGACGAAGAAGGACGCCGCGAAGGCGGACGACGAGGAGGCTGCGGCCCCGCGCCGGCGGACCCGCAAGCCGGCTTAG
PROTEIN sequence
Length: 311
SVPVKLYSATTNHDIRFHQVHATDGGRIRYKRTCSIDGEEVEYADIVKGFETEDGELITLDEGDLDSLPVATGHEIDVIEFVPSDQIDPLLFDKSYYLEPETKAAKPYALLREALTDTDRMAVVKVALRQRETLALLRVRGKAIVLQTMLWPDEVREPEFDILDVEVELRPQELQMAASLVESLGADFEPSDFHDEYRDAVADMIERKRTSGDSRPAPAPEKPADDGDSMTDLLTALQRSVEAARGTSGKAPEKPAEEKPAAAKADDAAEEKAEEKAEKPKPRRRTTKKDAAKADDEEAAAPRRRTRKPA*