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cn_combo_scaffold_16556_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 4855..6720

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKP4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 634.0
  • Bit_score: 942
  • Evalue 2.40e-271
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 630.0
  • Bit_score: 941
  • Evalue 1.20e-271
  • rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA23251.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 630.0
  • Bit_score: 941
  • Evalue 5.80e-271

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1866
GTGGCACGCAGGGGCGGTGGCATCGGCCCGTCGGCGCTGCGTGCGCTCGTGGTGCTCGTCCTCGCGGCGCTGCTCGCGGCGTGTGTGAACGAACCGGCGCCCCGCGTGGTGACGCTGCCGCCCACACCGACGTCGTCGGCTTCGGCCCAGCCGGAGCCGACGACGGTGACGGTGGGCGTGGAGTCGATCGGCGCCGGGTTCAACCCGCACCTGTTGGCGCACCAGTCGCCGGTGACGACGGCGCTGGAGACGTTGGTGCTGCCGTCGGTGTTCCGCCCGGACGTCGACGGAACGCTGCGGCTGGACCAGACGGTCGCGACGAGTGCGCGCGTGACGTCGACGGATCCGTTCACGGTGAGCTACGAGCTCAACGTGCAGGCGTCGTGGACGTCGAACGCACCGATCGCGGCGGAGGACTTCGTCTACCTGTGGGAGCGGATGCGCTCCGAGCCGGGGACGGTCGACGCGGCGGGCTACTCGTTGATCACCGACGTGCGGTCGCGTGCGGGCGGCAAGGCCGTCGACGTGGTGTTCTCGCGGCCGTACGAGCACTGGCAGGAGCTGTTCTCGGGGCTGCTCCCCGCCCACATCCTGAAGGACGCACCCGGTTCGTGGACGGGTGCGTTGGCGGGTGGGCTGCCGGCGTCGGGCGGGCCGTTCCGGGTGGTGTCGGTGGACCGTGCGCGCGGCGAGGTCGTGCTGGCGCGCAACGACCTGTACTGGGCGACGCCGGCCAAGCTCGACCGCATCGTGCTGCGCGCGGTGGACGACTCGACGATGGTCGACGAGCTGCGCTCGGGGGACCTCGACGCGGCGTTGCCGGAGGCCGATCCGACGGTGCGGCAGCTGCTCGCGGCGCTGGGGCCGGCGGTGCGCACGCAGGACGCGCCGCAGCCCGTCGTGACGGGGCTGGGGTTCCGGTCGGACGTGGGCCCGCTGGCCGACGTGCGGGTGCGGCAGGCGGTGGCGGCCACCCTGGACCGGGACGCGTTGCGCTCGCAGGTGGCGCCGGGCTCGTTGGCGGCGGATGCGTTCGGGCTCGCGCCGTCGGAGACCGGGTACGCCTCGACGGCTCCGGCAGGGGCGCCCGCGACGCCGAATCCAGCTGAGGCGCAACGGCTCCTGATCTCGGCGGGCTACGTGCGCGACGCGCAGGGCCGCTGGACGGTCGGTGGGCAGCCGCTCCAGATCGTGGTGGCGGCGGCCGCGGAGCGCCCGCAGGACGTGAAGCTCGCCCAGGCGGTGGCCGCGCAGCTGACCGCGGGCGGCATCACGACGACGGTCCTGGCCCCGTCCGCGGCCGACCTGATGGCGCAGCCCGACGTGCCGGCGACGCCGCCGACGACCGACCCGGCCGCCCCGGGCGCGACGACGACGCCGCCCGTGACCACGTCATCGACACGGTCGCGGACGACGACCCGGGCGACTCCGCCGGCCACGACGACGACCCCGTCGACGAGCGGTGCCACGAGCACCACGCAGGCACCCCCGACCGGCCGCGTCCGCGCCGACCTGATGGTCCTGCCACGGCCCGTGGGCGGCGACGTGAGCACCCGCTACGCCTCCGACTACGGCTGTCCCGTCGCGCTGCCGGGCGGTGCCACGGCGGCCACGAGCCCGACGCGGTTCTGCTTCCCTGCGATGCAGTCGCTGCTCACGGGTCTCGTCGACGGCACGGCCGCCCCCGGGACGCAGGCCGTCGTCGAGAAGGTGCTGTGGGCGCAGCTGCCGGTGCTGCCGCTGTACCAGCAGGTCGCGGTGGTCGCGAGCACGACCGCGACGGACGCCTCGACGGGGATCTCCCCGGGCCCGCTCCGCACGGGTCCGTTGACGGGCGCACAACGCTGGACGGCGCCCCCGGGTTGA
PROTEIN sequence
Length: 622
VARRGGGIGPSALRALVVLVLAALLAACVNEPAPRVVTLPPTPTSSASAQPEPTTVTVGVESIGAGFNPHLLAHQSPVTTALETLVLPSVFRPDVDGTLRLDQTVATSARVTSTDPFTVSYELNVQASWTSNAPIAAEDFVYLWERMRSEPGTVDAAGYSLITDVRSRAGGKAVDVVFSRPYEHWQELFSGLLPAHILKDAPGSWTGALAGGLPASGGPFRVVSVDRARGEVVLARNDLYWATPAKLDRIVLRAVDDSTMVDELRSGDLDAALPEADPTVRQLLAALGPAVRTQDAPQPVVTGLGFRSDVGPLADVRVRQAVAATLDRDALRSQVAPGSLAADAFGLAPSETGYASTAPAGAPATPNPAEAQRLLISAGYVRDAQGRWTVGGQPLQIVVAAAAERPQDVKLAQAVAAQLTAGGITTTVLAPSAADLMAQPDVPATPPTTDPAAPGATTTPPVTTSSTRSRTTTRATPPATTTTPSTSGATSTTQAPPTGRVRADLMVLPRPVGGDVSTRYASDYGCPVALPGGATAATSPTRFCFPAMQSLLTGLVDGTAAPGTQAVVEKVLWAQLPVLPLYQQVAVVASTTATDASTGISPGPLRTGPLTGAQRWTAPPG*