ggKbase home page

cn_combo_scaffold_18293_2

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 382..1527

Top 3 Functional Annotations

Value Algorithm Source
Virulence factor Mce family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXJ6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 384.0
  • Bit_score: 664
  • Evalue 6.00e-188
virulence factor Mce family protein similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 384.0
  • Bit_score: 663
  • Evalue 4.90e-188
  • rbh
Virulence factor Mce family protein {ECO:0000313|EMBL:AEA27579.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 384.0
  • Bit_score: 663
  • Evalue 2.40e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
GTGAGCCGCGTCCCCGTCGCACCGCTGGTCAAGTTCCTCGTGTTCGCCGTGGTCACCGCCCTGGCCACCACCGTCCTGGCGTTGACGATCGCCAACTCCCAGGGCGGGGAGCGCACCGACTACAGCGCCCGGTTCACCGACGCCTCGGGTCTGCTCCCGGGCGACGACGTGCGGATCGCGGGAGTCGTCGTCGGCACGGTCGACTCGGTGGAGATCGTCGACCGCCGGTTCGCACAGGTCGGGTTCAGCGTCGACTCCGCGCAGAAGCTGCCCGGCTCGGTGACCGCGGCCGTCCTCTACAAGAACCTCATCGGCCAGCGCTTCCTGTCGCTGGCCCAGGGCGACGGGGGCAACCCGGTGCCGCTGCCGCCGGGCGGGGAGATCCCGGTGCAGCGCACGACGCCCCCGCTCGACCTGACCACCCTGTTCAACGGGTTCCAGCCGCTGTTCGCCGCGCTCGACCCGGAGCAGGTCAACAAGCTGTCGATGGAGATCGTCGAGGTCCTGCAGGGCCAGGGCGGCACCATCGACAGCCTGCTGTCGAGCACGGCGTCGCTGACCAGCACGATCGCCGACCGCGACCAGGTCATCGGGCAGGTCATCGACAATCTCGACGCCGTGCTGCGGACGGTGTCGGACAACGACCAGCAGCTCAACGACCTCATCGTGTCGCTGCGCGAGCTGGTGTCGGGGCTGGCCGGGGACCGCAAACCCATCGGCGACGCCATCGCCTCCCTCGGCGACCTGACGACGACCACGGCGGGGCTGCTCGAGGAGGGCCGGCCGGCGTTGAAGCAGGACATCGCGTCGCTGGGCGACCTGTCCGACCAGCTCAACCAGGGCGAGCCGACGATCGAGCACTTCCTGCAGTTCGCGCCGTACAAGCTCAACAAGCTGGGCCGGGCCGCGAGCTACGGCAGCTGGTTCCAGTTCTACCTCTGCGGGCTGTCGGGGTCGGTCGGCATCGGCGGGCTCGTCCCCGCGCAGGAGCTGCCCGTCTTCCAGTCCGACGCGCCGCGCTGCGGGGCCGACCCGTCCGGTTCCGGGGGCGAGAGCCCGCCGCTGCTGCCGGCCCCGTCGAACCTCCCGATCCCGTCCCAGCTGCCCGCCCTGCCGCCCCTCCCGGTTCTCGGGGGTGGCTCGTGA
PROTEIN sequence
Length: 382
VSRVPVAPLVKFLVFAVVTALATTVLALTIANSQGGERTDYSARFTDASGLLPGDDVRIAGVVVGTVDSVEIVDRRFAQVGFSVDSAQKLPGSVTAAVLYKNLIGQRFLSLAQGDGGNPVPLPPGGEIPVQRTTPPLDLTTLFNGFQPLFAALDPEQVNKLSMEIVEVLQGQGGTIDSLLSSTASLTSTIADRDQVIGQVIDNLDAVLRTVSDNDQQLNDLIVSLRELVSGLAGDRKPIGDAIASLGDLTTTTAGLLEEGRPALKQDIASLGDLSDQLNQGEPTIEHFLQFAPYKLNKLGRAASYGSWFQFYLCGLSGSVGIGGLVPAQELPVFQSDAPRCGADPSGSGGESPPLLPAPSNLPIPSQLPALPPLPVLGGGS*