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cn_combo_scaffold_18293_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 5022..6248

Top 3 Functional Annotations

Value Algorithm Source
Virulence factor Mce family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXJ2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 408.0
  • Bit_score: 666
  • Evalue 1.70e-188
virulence factor Mce family protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 408.0
  • Bit_score: 665
  • Evalue 1.40e-188
Virulence factor Mce family protein {ECO:0000313|EMBL:AEA27575.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 408.0
  • Bit_score: 665
  • Evalue 6.90e-188

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
GTGATCACCCGCACCATCAAGCTGCAGCTCATCGCGCTGCTCGCCGTCACGCTCCTCGGCGTCGGCTACGTGGGCTTCCGCTACGCCGGGCTCGGCAACGTCTTCGGCACCACCACCTACCCGGTGACGATGAAGCTCTCCGACTCCGGCGGCATCTTCTCCGGCGCCGACGTCACCTACCGCGGCGTCAGCGTCGGCCGGGTCGGCGACCTCACCGTCACCGCCGACGGCGTCGACGTCCGCCTCGACATCCGCAAGTCCGCGCCGGAGATCCCCGTCGACCTGCGCGCCGCAGTCCGCAACCTCTCCGCGATCGGCGAGCAGTACGTCGACCTCACCCCGCAGACCGGCGGCGGCGCCGTGCTCGGCGCGGGCTCGGTCATCCCCGTCGACCGGACCTCCGTCCCGGTGCCGGTGAACGACCTCGTCGCGAGCCTCGACGACTTCGTCCGCTCCGTGCCGCTCGACTCCCTGCGGACCGTCATCGACCAGCTCGGCACCGCCTTCGCCGGCACCTCCCAGCCGCTGCAGCAGCTCCTCGACTCGTCCAACGAGTTCACCGGCGCCGCCGTCGACGCCCTCCCGCAGACGACGGCGCTCCTCGCCGACGGCCGCACCGTCCTCACCACGCAGAACGACATCTCCGGCCAGTTCACCGACTTCAGCCACAACCTGGCGCTGCTCGCCGCCCAGCTCAAGACGTCCGACCCCGACCTGCGGCGCCTCATCGAGGCCGGACCCGGTGCGGCACAGCAGGTCTCGGCGCTGCTCTCGGAGAGCGGCAGCGGGCTCGGCACGGTCATCGACAACCTGCTGACGGTCAGCCGCGTCGCCGAACCCCGCCAGGCCGGGCTGCGCCAGCTGCTCGTCACCTACCCCGGCGTCGTCGCCAGCGGCTACACCGTCGTCCCCGGCGACGGCACCGCCCACCTCGGCCTCGCCGTCAACCTGTTCGACCCCATCGTCTGCGCCAAGGGCTACGAGACCACCCAGCGCCGCCCCGGCAACGACGTCGCCGAGACCCCCGTCAACGGCAACGCCTACTGCGCCGAACTGCCCGGCAGCACCACCGACGTCCGTGGCGCACAGAACGTCCCGCGCGCCGAGACGCCGAAGCCGCCGCCCGGCACCCGCAGCGGGGGCGCCGGGCAGACCGTCCCGGCGGGCTCCGATCCCGACCCGTGGCGCATCCCCCTGACCACCCCCGCACAGATCCTCGAACCGTGA
PROTEIN sequence
Length: 409
VITRTIKLQLIALLAVTLLGVGYVGFRYAGLGNVFGTTTYPVTMKLSDSGGIFSGADVTYRGVSVGRVGDLTVTADGVDVRLDIRKSAPEIPVDLRAAVRNLSAIGEQYVDLTPQTGGGAVLGAGSVIPVDRTSVPVPVNDLVASLDDFVRSVPLDSLRTVIDQLGTAFAGTSQPLQQLLDSSNEFTGAAVDALPQTTALLADGRTVLTTQNDISGQFTDFSHNLALLAAQLKTSDPDLRRLIEAGPGAAQQVSALLSESGSGLGTVIDNLLTVSRVAEPRQAGLRQLLVTYPGVVASGYTVVPGDGTAHLGLAVNLFDPIVCAKGYETTQRRPGNDVAETPVNGNAYCAELPGSTTDVRGAQNVPRAETPKPPPGTRSGGAGQTVPAGSDPDPWRIPLTTPAQILEP*