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cn_combo_scaffold_20093_1

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1..384)

Top 3 Functional Annotations

Value Algorithm Source
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO: similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 265
  • Evalue 3.80e-68
Pup--protein ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX42_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 265
  • Evalue 2.70e-68
proteasome accessory factor PafA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 265
  • Evalue 7.70e-69

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCAGCGTCGGATCTACGGTGTGGAGACCGAGTTCGGGGTCACCTGCACCTTCCACGGCCAGCGCCGGCTCTCACCGGACGAGGTGGCCCGCTATCTGTTCCGGCGTGTCGTGTCCTGGGGCCGGTCGTCCAACGTCTTCCTCCGCAACGGGGCACGCCTCTACCTCGACGTCGGGTCCCACCCCGAGTACGCCACCGCCGAGTGCGACTCCCTCACCCAGCTCGTGGCCCACGACAAGGCGGGCGAACGCATCCTCGAGGACCTCCTCGTCGACGCCGAACGACGGCTCGTCGACGAGGGCATCGGCGGCGACATCTACCTGTTCAAGAACAACACCGACTCGGCAGGCAACTCCTACGGCTGCCACGAGAACTACCTCGTC
PROTEIN sequence
Length: 128
MQRRIYGVETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYATAECDSLTQLVAHDKAGERILEDLLVDAERRLVDEGIGGDIYLFKNNTDSAGNSYGCHENYLV