ggKbase home page

SR-VP_26_10_2019_C_20cm_scaffold_3741_3

Organism: SR-VP_26_10_2019_C_20cm-73-Thermoproteota-372_1

near complete RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 1 ASCG 34 / 38 MC: 1
Location: 1292..1630

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator NikR, CopG family n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D597_METSW similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 112.0
  • Bit_score: 109
  • Evalue 1.30e-21
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 112.0
  • Bit_score: 109
  • Evalue 3.60e-22
Transcriptional regulator NikR, CopG family {ECO:0000313|EMBL:AEG18205.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 112.0
  • Bit_score: 109
  • Evalue 1.80e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanobacterium paludis → Methanobacterium → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 339
ATGAACGACGTCCAGAAGAACTCTGGTTTCACGGGAAGGTCTGAGCTCGTGCGCGCAGCCATACGCATGCTTCTCGAAGACTCCCGGGAGAAGGCGAGTGCCGTCGGTGAGATGAACGGGTTGCTCATAGTCACACATGACGAAGAGGAGGAGGCTCCGGTGACGAAGTTGAAACACCAGTTCGAGGACATCATCATGACGCACGTCCACAACAACACAAAGTCGTCTCTGTGCATCGAGGTCTTCCTGCTTCAAGGGGACGCCAAGAAGATCAACGCTATGAGCAGGTCCTTCCAGGCCGAAGATAAGATGAAGAGTACGAAGTTCGTGCCCATTTAG
PROTEIN sequence
Length: 113
MNDVQKNSGFTGRSELVRAAIRMLLEDSREKASAVGEMNGLLIVTHDEEEEAPVTKLKHQFEDIIMTHVHNNTKSSLCIEVFLLQGDAKKINAMSRSFQAEDKMKSTKFVPI*