ggKbase home page

RTP_07252018_0_1um_scaffold_1140_20

Organism: RTP_07252018_0_1um_Hydrogenophilales_62_9

near complete RP 46 / 55 MC: 5 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 5
Location: comp(15723..16262)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, small subunit id=12498668 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 179.0
  • Bit_score: 308
  • Evalue 3.00e-81
TRAP transporter, small subunit similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 179.0
  • Bit_score: 280
  • Evalue 2.50e-73
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 179.0
  • Bit_score: 327
  • Evalue 1.10e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAACGCACTCCTCGCCCTGTCGCGCGCGATCGACGCGCTCACCGAACGCATCGGCCGTCTGGTCATCTGGCTGGTGCTGGTCGCCACGCTGGTTTCGGCGGGCAATGCGCTGGCGCGCTGGGCGCTCGGCGCTAGCTCGAATGCCTGGCTGGAAATCCAGTGGTATCTGTTCGGCGCGGTGTTTTTGCTGGCGGCGGGCTACACGCTCAAGCACAACGGCCATGTGCGGATTGATATTTTCTACGGACGCTTGAGCGCCAAAGGCCAGGCATGGGTCGATCTCATCGGCGGGCTGTTTTTTTTACTGCCGATGGCCGGGCTGCTGGTCTGGCTGGCGTGGCCGATGTTCATGGACGCCTGGCGCTCGCATGAAATGTCGCCCGACGCCGGCGGCCTGCTGCGCTGGCCGGTGAAGCTGCTGCTGCCGCTGGGTTTCGGTCTGCTGGCGCTGCAGGGCGTGGCCGAAATCATCAAGCGCATCGGTGTATTGACCGGCGCGCTCACGCTGGAATCCGAAGCCCCGGCGGAGGAGGTGTGA
PROTEIN sequence
Length: 180
MNALLALSRAIDALTERIGRLVIWLVLVATLVSAGNALARWALGASSNAWLEIQWYLFGAVFLLAAGYTLKHNGHVRIDIFYGRLSAKGQAWVDLIGGLFFLLPMAGLLVWLAWPMFMDAWRSHEMSPDAGGLLRWPVKLLLPLGFGLLALQGVAEIIKRIGVLTGALTLESEAPAEEV*