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RTP_11222018_0_1um_scaffold_3479_6

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3924..4523)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor (Sigma-24) n=1 Tax=mine drainage metagenome RepID=E6QV76_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 199.0
  • Bit_score: 329
  • Evalue 1.80e-87
RNA polymerase sigma-E factor (Sigma-24) {ECO:0000313|EMBL:CBI11149.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 199.0
  • Bit_score: 329
  • Evalue 2.50e-87
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 200.0
  • Bit_score: 312
  • Evalue 6.50e-83

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 600
ATGACTGATCGTGAACTCGATCAACAGCTAGTAGAGCGCGTGCAGCGAGGCGACAAACGCGCATTTGATTTACTGGTGGTGAAATACGAACGTCGTTTAGCGCGGCTATTGTCTCGTTTCGTGCGCGACTCACACGAAGTGGAAGACATCGCACAAGAAACGTTCATCAAAGCTTATCGGGCATTAGCGAATTTTCGTGGTGATGCGGCTTTCTATACCTGGCTTTATCGTATAGGTATCAACACTGCTAAGAATTATTTAATGGCGCGTGGTCGGCGCGCACCAACGACCACTGAATTTGATGCTGAAGAAGCTGAAGGATTTGAAGGTGCTGAAAGGCTGCATGAGCTCAACACACCAGAAAGCGAGTTGCTCTCCAAAGAAATTGGGCAGGTCGTCAACGCTGCCATGGCAGCATTACCCGAAGATTTACGCACTGCCATTGCACTACGTGAAATAGAAGGACTAAGTTATGAAGAAATTGCTGAAACGATGGGTTGCCCCATAGGCACTGTGCGCTCACGTATATTCCGTGCGCGCGAAGCCATTGCGGCGAAATTACGCCCGATTTTGGGCACGAATACTGAAACACGTTGGTAA
PROTEIN sequence
Length: 200
MTDRELDQQLVERVQRGDKRAFDLLVVKYERRLARLLSRFVRDSHEVEDIAQETFIKAYRALANFRGDAAFYTWLYRIGINTAKNYLMARGRRAPTTTEFDAEEAEGFEGAERLHELNTPESELLSKEIGQVVNAAMAALPEDLRTAIALREIEGLSYEEIAETMGCPIGTVRSRIFRAREAIAAKLRPILGTNTETRW*