ggKbase home page

cn_combo_scaffold_3128_12

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(11228..11806)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4E9_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 152.0
  • Bit_score: 228
  • Evalue 4.20e-57
endoribonuclease L-PSP Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 192.0
  • Bit_score: 297
  • Evalue 1.40e-77
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 152.0
  • Bit_score: 228
  • Evalue 1.20e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAGGTCGAGAAGCGATTGAAGGAGCTCGGCATCGAGCTTGCCAAGCCTACGATGCCGGTGGGCAGCTATGTGAACGCCGTCCGCACGGGCAACCTGCTCTACATGGCGGGCAAGGGACCGGGCCAGCCGGGCCATCCAATGCCATCAGGCAAGGTCGGCCGCGATTTCACCGTCGAGGAGGGCTACGAGCATGCCCGCTCCGTCGGTCTCAGCCTCATCGCGGCCATCAAGGCCGAGCTGGGCGACCTCGACCGCGTGAAGCGGATCGTCAAGGTGCTGGGCATGGTCAACGCGGTCCCGGAATTCGGCCAGCAGCCCGAAGTGATCAACGGTTGCTCCGATCTCTTCGTCTCGGTGTTCGGCGAGCGCGGCCGCCACGCGCGCTCGGCGGTCGGCATGGCCTCGCTGCCGCGCGGTATCCCGGTCGAAATCGAGGTGATCCTGGAGGTCGAGGACGGCCCCGCCCGCCGCGCCGCTGCCAAACCGGCGGCTAAGCGAGTGGCCAAGCGCAAGGCCGCGCCCAAGACCAGGAAGAAAGCGGCCAAGAAGAAAGCGGCCAGGAAAAAGAAGAACTAG
PROTEIN sequence
Length: 193
MKVEKRLKELGIELAKPTMPVGSYVNAVRTGNLLYMAGKGPGQPGHPMPSGKVGRDFTVEEGYEHARSVGLSLIAAIKAELGDLDRVKRIVKVLGMVNAVPEFGQQPEVINGCSDLFVSVFGERGRHARSAVGMASLPRGIPVEIEVILEVEDGPARRAAAKPAAKRVAKRKAAPKTRKKAAKKKAARKKKN*