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cn_combo_scaffold_3263_15

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(12695..13366)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T027_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 219.0
  • Bit_score: 200
  • Evalue 1.90e-48
GntR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 223.0
  • Bit_score: 402
  • Evalue 3.50e-109
putative transcriptional regulatory protein, GntR family similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 215.0
  • Bit_score: 198
  • Evalue 2.60e-48

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGCCCGATCATTCCCGAACCAGATCTATCCGAACGTATCCACGACTCCGTCCTCGAAGCGATCTGCTCGGGCGAACTGAAATCCGGCGCGCGCATCACGCAGGAAGAGTTGGCGCAGCAGTTCGGCGTGTCGCGCCAGCCGGTCCTGCAGGCGATGATGCTGCTGCGGCGCGAGGGCTTCCTGATCGATGCCGGCCGCAAGGGTGTCTGCGTGGCGCCGCTCGACGTCCAGCAGGCGCGCAACCTCTATGCTGTGCGCGCCGCCCTCGATGGCGCGGCCGCCCGCTTCGCCGCCGCCAACTATACGCCTCGTCTCGTGCAGCGCGGCCGCCAGCTTCTCGATGTCGGCCGCCGCGCCGTGGCCAGCGGCTACGTGCCCTCTGTGATCGAAGCCGATATCGATTTCCATCTCTTCATTTACGAAGCCTCGGGCAATCCGCTGTTCGGCGAAACCGCGCAGCCGCACTGGCAGCATCTGCGGCGCGTGATGGCCGCCGCGCTGAGCGAAGAAGACTTGCGCATCAGCGTTTGGGACGAACACGAAGGCATCCTGCGCGCGCTCGAAGCCGGCCAGGCCGCGGAGGCCGAAGCGCTCTGCCGCGGCCATGCCGAGCAGATGGCCGACATTCTCACGGGACGACTGAAGGTCGTCATTTCACGCGCCGCCTGA
PROTEIN sequence
Length: 224
MRPIIPEPDLSERIHDSVLEAICSGELKSGARITQEELAQQFGVSRQPVLQAMMLLRREGFLIDAGRKGVCVAPLDVQQARNLYAVRAALDGAAARFAAANYTPRLVQRGRQLLDVGRRAVASGYVPSVIEADIDFHLFIYEASGNPLFGETAQPHWQHLRRVMAAALSEEDLRISVWDEHEGILRALEAGQAAEAEALCRGHAEQMADILTGRLKVVISRAA*