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cn_combo_scaffold_4612_6

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4411..6735)

Top 3 Functional Annotations

Value Algorithm Source
Putative organic solvent tolerance protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRV0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 774.0
  • Bit_score: 1249
  • Evalue 0.0
putative organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 774.0
  • Bit_score: 1249
  • Evalue 0.0
  • rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 774.0
  • Bit_score: 1249
  • Evalue 0.0

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2325
ATGGAGACGACAAGCTTGGCGAGCGAGATGCGCCGCGAAGAGGACAAGCAGGAAAGCAACCGACTCGGCTTCGCCGCGCCGGCGCTGGTGGCTGCGCTCCTTCTGCTTGCCTGCATGGCCGGGCCGGCAAAAGCTCAGAATTCGGCTGAAAATGGCCCGGATTTTCGCGAACCGCCCTCACGCAAGGCCGACGTTGCGCCGCCCGGCCAGCCCATCTCCGCGGAGGAAATCGGCTTCGAGGCGAACCGCATCGATTATGACTATGAGAACGACGTGGTCACAGCCTCGGGCAATGTCCATGTCGCACGCGACGGTTCGCGACTCGTCGCCGATCAGGTGGTGTGGGACCGCAAGGCCGGCACGGTGATCGCGCGCGGCGACGTCGCCCTGTTCAGTGCTCAGGGCGACAAGGCCTATGCCGACGAGATGGACGTCACCGAGAGTCTGCGCGACGGCGTCATCGACAATCTGCTGATCGTCACCAAGAATGCCAATCGTCTTGCGGCCGACAAAGGCCAGCGGACCGGCGACATCTATGTGCTGGAGCATGCCGCCTACACGCCTTGCCGCGTGGAAACTGACGCCGGCTGCCCCAAGGAACCGACCTGGCAGATCCAGGCCGACAAGGTTGTGCTGGACAATGCCCGTGAGCGGGTCCGCTATACCAATGCCCGGGTGAAGCTGCTCGGCATGCCGCTGATCCCGCTGCCGGGCCTCCGCCACAGCATCGGCGACGAAGGCGGCGACGGATTGCTCGTCCCGGACATCGGCTATGACCGTCGCAACGGCTTCGAAGCGAAGATCCCCTATTACTGGCGGCTCGACGCCAATCGCGATCTCACCGTCACCCCGCACATCTACAGCGCGGTGTTGCCGATGCTCGGCGCGAACTATCGGGCGCTGCTCTCGAACGGCGCCTATCAGATCGGCGGTTACGCCACGGTCAGCGGCGTGACCTCGGTCAATGGCGGGGCGACCACCGCGACCAGCGACCAGCGCTTGCGCGGCTACTTTCAGGCCAGCGGAAAATTCCAGTTCGATCCACTGTGGTCGCTCACCGGATCACTGCGCTATGTCAGCGACAACACTTTCCTCAATCGCTACGATCTGAGCCGCGAGGACCGGCTGCGCTCGACCCTGAACCTCGAGCGCATCGGCGTGCGCAGCTACCTCTCGATCGCCGGTTGGGACTTCCAGTCGCTGCGCTCCAACGCCGCCTCGGGGCAGGTCCCCGTTGCCATTCCGGCGATCGATTATCGCCTGCGCCTGGCCGATCCGCTGCTGGGCGGGACGGTCCAGATCCAGGCGAATAGCCTCGCCATTTTGCGCACCGGGGGGCAGGACACTCAGCGCGCGTTCGCTGGCGTCACCTGGAGCACCACGCGCCTGACCGGACTTGGCCAGGAACTGACGCTGACCGGCTATGCGCGCGGCGATGTCTATCACAGCGCGGAGAACAGTCTCAGCCCCACGGTCATCTATCGCGGCGAGCCGGGCTGGCAGACGCGCGGCATCGCGGCGCTGGCGCTCGACATGCGCTGGCCGTTCATCGGCAAGGCGCTGGGCGGCACCCAGCGGATCGTTCCGCGCGTTCAGCTCGTCGTCGCTCCGCGCCTGTCCAATCTCAACGTGCCGAATGAAGACGCCCGCGCCATTGACCTGGAGGATTCCAACCTCTTCGCGCTCAACCGTTTCCCCGGCTATGACCGGTTCGAGGATTCGAGCCGTATCACTTATGGCCTCGATTACCGGCTCGACCGGCCCAACTTCACCTTCGATGCGACGATCGGCCAGAGCTATCGCCTGAGCCAACGCCAGACGGTCCTGCCCAACGGCACGGGCCTTTCTGACCGGCTCTCGGACATCGTTGGCCGCGCGCAGCTGCGTTACAAGGACTTCGTCCAGATCACGCACCGCTTCCGTCTCGACAAGGAAAATCTGGCCGTGCGCCGCAACGAGATCGAGGCGACGATCGGCTCGCGCAAGACCTATGTCGAGGTCGGCTATCTCCGCCTCAATCGCAATGTGACCGCCGGTGTCGAGGATCTGCGCGACGTCGAGGAAATCCGTGTCGGCGCGCGCGCGTCCTTCGCCCGTTACTGGTCCGTGTTCGGCTCGACCAACATCGACCTGACCGGCTTCAGTGACGATCCCAACAGCGTGCTCTCCGGCTTCGAGCCGGTCCGCCACCGTGTCGGCGTAGCCTATGAGGACGACTGCCTCGAGGTCGGCTTCACGTGGCGCCGCGATTATCAGACCGTGGGCGACGCACGATCGGGCAATTCCTTTCAGCTGCGGCTGGTATTTAAGAATCTGGGTCTGTAA
PROTEIN sequence
Length: 775
METTSLASEMRREEDKQESNRLGFAAPALVAALLLLACMAGPAKAQNSAENGPDFREPPSRKADVAPPGQPISAEEIGFEANRIDYDYENDVVTASGNVHVARDGSRLVADQVVWDRKAGTVIARGDVALFSAQGDKAYADEMDVTESLRDGVIDNLLIVTKNANRLAADKGQRTGDIYVLEHAAYTPCRVETDAGCPKEPTWQIQADKVVLDNARERVRYTNARVKLLGMPLIPLPGLRHSIGDEGGDGLLVPDIGYDRRNGFEAKIPYYWRLDANRDLTVTPHIYSAVLPMLGANYRALLSNGAYQIGGYATVSGVTSVNGGATTATSDQRLRGYFQASGKFQFDPLWSLTGSLRYVSDNTFLNRYDLSREDRLRSTLNLERIGVRSYLSIAGWDFQSLRSNAASGQVPVAIPAIDYRLRLADPLLGGTVQIQANSLAILRTGGQDTQRAFAGVTWSTTRLTGLGQELTLTGYARGDVYHSAENSLSPTVIYRGEPGWQTRGIAALALDMRWPFIGKALGGTQRIVPRVQLVVAPRLSNLNVPNEDARAIDLEDSNLFALNRFPGYDRFEDSSRITYGLDYRLDRPNFTFDATIGQSYRLSQRQTVLPNGTGLSDRLSDIVGRAQLRYKDFVQITHRFRLDKENLAVRRNEIEATIGSRKTYVEVGYLRLNRNVTAGVEDLRDVEEIRVGARASFARYWSVFGSTNIDLTGFSDDPNSVLSGFEPVRHRVGVAYEDDCLEVGFTWRRDYQTVGDARSGNSFQLRLVFKNLGL*