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cn_combo_scaffold_6603_5

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(2501..2902)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:BAK64854.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK64854.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 1.40e-57
Protocatechuate 4,5-dioxygenase alpha chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJI4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 1.00e-57
protocatechuate 4,5-dioxygenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 2.80e-58

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGCGTACTCGCCTCTATTCGCTTTCCGAGCTGAACGACATTCCCGGCACCACGGTGTTCAATGCCCGGCGGTCACGCGAGGCTTACCATCTCCACAAATTCTGCATGTCGCTGATGGACGCCGCGAACCGTGCCGAGTTCAAGGATCATGAGCGCGCCTATCTCGACAAGTTCAAGATGAGCGAGGAACAGAAGCGCGCGGTGCAGGATCGCGACTTCAACAAGCTCATCGACCTGGGCGGCAATATCTATTTTCTCGTCAAGCTCTCCAACACGGATGGCTGGAGCACGCAGCGCGCGGTCAGTTCCATGACCGGCATGACCGCCGACGAATATGCCGCGATGATGCGCGCCGGCGGCCGCTCGCCCGAAGGGCAGCGCTCGATCCGGGAGGGCAACTGA
PROTEIN sequence
Length: 134
MRTRLYSLSELNDIPGTTVFNARRSREAYHLHKFCMSLMDAANRAEFKDHERAYLDKFKMSEEQKRAVQDRDFNKLIDLGGNIYFLVKLSNTDGWSTQRAVSSMTGMTADEYAAMMRAGGRSPEGQRSIREGN*