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cn_combo_scaffold_11049_9

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4623..5228)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S30 n=1 Tax=Sphingobium xenophagum RepID=UPI00030237EB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 201.0
  • Bit_score: 402
  • Evalue 2.90e-109
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCW20187.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 200.0
  • Bit_score: 393
  • Evalue 2.50e-106
rpoN; sigma 54 similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 199.0
  • Bit_score: 345
  • Evalue 1.20e-92

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGATATTCGTGTTTCCGGGCATCAGGTCGACACGGGCGATGCGCTCAAGCAGCATGTCGCAGACCGCATGGAGGCGATGGCCGAGAAATATTTTTCCCGCACGATTTCGGCCCATGTGACCTTTCGACCCGCGCCGCACGGCGCCTTCCACTGCGACATCATCTGTCATGTGATGACCGGCCTGATCCTGAAGGGAGCAGGCGAGGCGCAGGAGGCGCATCCGTCCTTTGACCAGGCGGCGGACCGGATCGAAAAGCAGCTGCGCCGCTATATGCGCCGCCTGAAGGACCGGCACAGCCAAGCCAGTGCGGCCGAAGCGCAGCGGGTCAGCAGCTTGAGCGTCGATGATATTGACGGGGCGGGCTACACCATCTTCGCCTCGCCCGCGGACGAGCAGGAGGAGGTCGAGGATTCCCCGCTGATCGTTGCGGAAACGCGCGTCGATATTCCCGAAGCCAGCGTGTCCGACGCGGTGATGATGCTGGACCTGCGCAACACCAATGCGCTGCTGTTCGTCAATGCCGGCACCGCGGCCTACAACATGGTCTATCGTCGCCATGACGGGACCATCGGTTGGGTCGAACCGCGCATGACGGCGCGCTGA
PROTEIN sequence
Length: 202
MDIRVSGHQVDTGDALKQHVADRMEAMAEKYFSRTISAHVTFRPAPHGAFHCDIICHVMTGLILKGAGEAQEAHPSFDQAADRIEKQLRRYMRRLKDRHSQASAAEAQRVSSLSVDDIDGAGYTIFASPADEQEEVEDSPLIVAETRVDIPEASVSDAVMMLDLRNTNALLFVNAGTAAYNMVYRRHDGTIGWVEPRMTAR*