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cn_combo_scaffold_12023_11

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(5454..5672)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-1 n=1 Tax=Sphingobium sp. HDIP04 RepID=T0IIG6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 145
  • Evalue 2.30e-32
infA; translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 145
  • Evalue 6.50e-33
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 145
  • Evalue 3.20e-32

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGCCAAAGAAGAACTGCTTGAAATGCGCGGACAGGTTGTGGAGCTTCTCCCCAACGCCATGTTCCGCGTCCGGCTTGAGAATGATCATGAGATCCTCGGCCATACCGCTGGTAAAATGCGCAAGAACCGCATCCGCGTCCTCGTGGGGGACGAGGTGCTGGTCGAACTCACGCCCTACGACCTGACCAAGGGTCGGATCACCTACCGCTTCAAATAA
PROTEIN sequence
Length: 73
MAKEELLEMRGQVVELLPNAMFRVRLENDHEILGHTAGKMRKNRIRVLVGDEVLVELTPYDLTKGRITYRFK*