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rifcsphigho2_12_scaffold_4339_20

Organism: RIFCSPHIGHO2_12_FULL_Steel_Borg_32_12

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(12527..16186)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Ther similarity UNIPROT
DB: UniProtKB
  • Identity: 31.1
  • Coverage: 512.0
  • Bit_score: 203
  • Evalue 2.20e-48
tRNA-splicing ligase RtcB n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A4Q8_THESM similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 512.0
  • Bit_score: 203
  • Evalue 1.60e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 512.0
  • Bit_score: 203
  • Evalue 4.40e-49

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Taxonomy

Thermococcus sibiricus → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3660
ATGCCATTTCTTAAATGGATAGGTGGCAAATCTCAGGTGTTACATGTATTTAAGGATTATTTTCCAGACTTTTACAGTGTGAAAGGATATATAGAACCATTTTGTGTTTGCAAAGATTCGGTTGTACTACTTGGTCAACAAGATAGAATCAAGATACAAGATATAGAATCAAGAAAAGATAAACAAATAGACCTTTTTGGAGAATTCGATTATATTGATAATGTAATGGGTCTTGATATAGAACATAGTAATGAAGAAGAAGATAGAGACAATCTGATAAAGACATCCCATATAGGAAATTTCTTCGTCAAAGATAGTAAAGACACTGATATATATAATATATCAACTAGAAATAGAAGATCGTTGAACGCAACTGGGGATCATATATTTCTTACTAAGAATAAAGATAAATTGGAATGGAAACAGTTGAAAGATATAAAGTATGGAGATATGGTAGCAATATTTCCTTCTATAATTCCTCTCAACGATAATGTATATAAAGAGAAAATTATATTGGACGAACAAAATATTATAGATAACATTCCTGACAATACAGATAGGGAAAAAATATTAAGAGAATTAAAAAATGCAGGATTGCTGCCTTTAACCAATAAAAATCCAAAGTTATATATAATTGCTAGATTATATGGTTTTCTGGTGACAGACGGAAGTTTAAGCGAGATTAGATGTAAAGGAGAAATGAAAAAAACTTATGTTCACACTAGATTTATAGGAGGTAACAAATTATTTGATGTACTAAAAGATATTAAATTGTTAGGAATTAATGTTGGAGCAAATATATCTGATATAAGAGAAAAATTTACTTCAGATACGACTTGGGGAAAATGTTCAGATATCGATATATATACTAAGACCATTTTTATATTATTCAAAGCTCTTGGTGCACCTATAGGTAAAAAGACAGATCAAGCATATAAAATACCTCAGTGGATATACCAATGCTGCATGAGAGTAAAACAAGAATTTCTAGGTGGTATAATGGGTGGCGATGGTACAACAGTCAATTATTATAATAGGAAACATCCTTCAGGAAGAATTATACCAGATATAGTCGGCGCAGGTATTACGCAAAGTAAGATAACCGATTTAGAATCTTCATTGTTAGAATATTTGCATGAAATATGCATTTTATTAAATGAATTTGGATTAAAATATAGATTACAATATGTAGGAAAAAAGAGTAATAGAGATGACGGGAAAGAGGTAGTTACATATAGAATCGACCTTTTAGATAATCATGAAAATACATTAAGATTCCTAAAATATATTGGATATAGATATGACAATCAAAAGATAATGATATCATATCCAATATATGAATATCTATTGTCAAAGGAAAAAAGGATAGGTATAAACAATAGAATATCTAGAGGAAATTCTTTTCCGGTATATGAAAGATGGGAGAAAACATACAAATTAGATGGCATTGTATTTGATGAAGTAATCATTGTAAGAAAAATTGAATATAGCGGTAAACTATACGATATATCTGTGGAAAAAACTCACAACTATATCGTTAATGAATTTGTCACTCATAATTGTGGAGGAGGTTCAGTATTCTTTTATGTTATGGAGAATTATAGAGGAGCATTAGAAGGAAAACCTATTTTTATCTCAGATATAAACAAAGAACTTATAAATTGTTATAAGATTGTTAGGGATAATGTTGACAACGTGATTCCTCTTCTGGAAGAGCATCAAAAATTAAATAGTGAGGAACATTATTATGAGATAAGAAAAAAATATCCTCCTGGAAATGATATGGCTGATATTGAAAAAGCGGCGGCTTTTATATATCTAAGTAGGGCTGCGTTCGGAGGATTATGGAGGGTAAATTCTGAAGGAAAGATGAATGCTCCTTTTAACAAAAATCCTGCGATAAAAATAATGGATGACGATTTATATCATTATTCTAGATTATTGAAACCTGCTAATATAAATGTAATGAGTTTTGAAAATATATTAAAGATAAATAAGGGGAATTTAAAAGATTGGTTTGTATATTGTTGCCTACTAGGAACTAAAATAAGAATGTCGGATGAAAGATTATTAAATATAGAAGATATCAAAAAAGATGATAAGACTTTTATAGGAGGTAAAGTAATAGACATTTTTGAAAGAGATTATAACGGAAAAATATTCGAATTTGAGATTATGGGAATATATGATAATTTATGTGTGACAGAAGAACATCCTCTAGCTATAATAAGACAGAATGATGCATATCAAATACTTGAGAGATATTCTGATGGTAGAATACATATATCAAAATTCAAGAATCAGGAGGCATTAAATAGATTAGATATCAAATTTATAAGATCAAAAGACATAAATATTGGAGATTTTTTATTGGCTCCGTGTTATCCTGAAAATATTCTTGACATCAAAACTGTAAAAATTGGAGACATAGAAATTGACTGTAATGAGGAATTCGGATATATAATAGGATTTTGGTTGGCAGAAGGACACATAGAACATTATTACGGAAAATATTGTATTGATAAAGATCGATTGAATGATATTAAAACAGGAAAACAAAGTACAATATTTGATATATTCGATACAGGTGACAGTGTAGACGAAGATATAGACGAATTAATAAAGAAGAATGATTGCGATTCTTCTTATATTTTAGAATATTCTTGTGGTAAATTAGATTTTGATCACGGATTTATTGATAGGTTAAACAAATGGTATAATCGTTATTTTAAAATAACAGGAAACGTTTATAAACTTCCATGGGAATGTTGGCAGATATCTTATCATGTAGAAGAACTTGCTAAATTCTTACATAAGAATTTCGGAGAAGGAGCAGAAAATAAAAAGATTTCTAACGAAATTTTGAATTATCCGTTAGAATTTCAAAAGGGATTACTGCGAGGATGGACTGATGGTGATGGAGGTATATGGGGAGATGAAAGGAATAGATGCAAGATAACAGGAACATCTGTCAGCAGACAATTAGCATTAGATATGTATTTGATAGCTTTAAGACTAGGATTGAGACCTGCATTGAAATATAGAGAATCTGGAAAATATAAAGGATCTTTTAAATATGACACTGTCTGTTGGGATACATATTTTTCGTCACAAGATGATGTCAAATATCTATACCCAAATTGTCATGATTTTAGTAATTCGAAAACAAGATCTCAAAGAAGAATAATAACTAAAGGAAATAAGAAATTTATTTTGACACCGATAACTAAAATTATTAAAAGAGAATATAGAGGAAAGGTTTATAATTTGCAGACAGAAAAACATGTATATATTATCGATTATGTTTTGAGTCATAATTGCGATCCCCCATATGCTGATACTGGACAGGGCGCATTTACAGGATATAGTAAGGATGGATATCATACTGCAAAGAGGGATTTGTTACCCAAAGTATTTAGAGAATTAGATAAAAGAGGAGCTAAGGTTATGATGAGCAATGCTGATGTTCCTGCTATAAGAAGCTATTTTTCTGATTTCAATATAAATGTGATAAAAACAAATAGACAAACTGGTATCCAATTAAGTAGTATAACAAAGGAAAAGATAGAGAATACTGGCAAATTGAATGAGGTAGTTGTAACCAATTATAAGTTTGGCAAAGGTGGTAAACAAACAACGATAGATGATACATGGGTTTGA
PROTEIN sequence
Length: 1220
MPFLKWIGGKSQVLHVFKDYFPDFYSVKGYIEPFCVCKDSVVLLGQQDRIKIQDIESRKDKQIDLFGEFDYIDNVMGLDIEHSNEEEDRDNLIKTSHIGNFFVKDSKDTDIYNISTRNRRSLNATGDHIFLTKNKDKLEWKQLKDIKYGDMVAIFPSIIPLNDNVYKEKIILDEQNIIDNIPDNTDREKILRELKNAGLLPLTNKNPKLYIIARLYGFLVTDGSLSEIRCKGEMKKTYVHTRFIGGNKLFDVLKDIKLLGINVGANISDIREKFTSDTTWGKCSDIDIYTKTIFILFKALGAPIGKKTDQAYKIPQWIYQCCMRVKQEFLGGIMGGDGTTVNYYNRKHPSGRIIPDIVGAGITQSKITDLESSLLEYLHEICILLNEFGLKYRLQYVGKKSNRDDGKEVVTYRIDLLDNHENTLRFLKYIGYRYDNQKIMISYPIYEYLLSKEKRIGINNRISRGNSFPVYERWEKTYKLDGIVFDEVIIVRKIEYSGKLYDISVEKTHNYIVNEFVTHNCGGGSVFFYVMENYRGALEGKPIFISDINKELINCYKIVRDNVDNVIPLLEEHQKLNSEEHYYEIRKKYPPGNDMADIEKAAAFIYLSRAAFGGLWRVNSEGKMNAPFNKNPAIKIMDDDLYHYSRLLKPANINVMSFENILKINKGNLKDWFVYCCLLGTKIRMSDERLLNIEDIKKDDKTFIGGKVIDIFERDYNGKIFEFEIMGIYDNLCVTEEHPLAIIRQNDAYQILERYSDGRIHISKFKNQEALNRLDIKFIRSKDINIGDFLLAPCYPENILDIKTVKIGDIEIDCNEEFGYIIGFWLAEGHIEHYYGKYCIDKDRLNDIKTGKQSTIFDIFDTGDSVDEDIDELIKKNDCDSSYILEYSCGKLDFDHGFIDRLNKWYNRYFKITGNVYKLPWECWQISYHVEELAKFLHKNFGEGAENKKISNEILNYPLEFQKGLLRGWTDGDGGIWGDERNRCKITGTSVSRQLALDMYLIALRLGLRPALKYRESGKYKGSFKYDTVCWDTYFSSQDDVKYLYPNCHDFSNSKTRSQRRIITKGNKKFILTPITKIIKREYRGKVYNLQTEKHVYIIDYVLSHNCDPPYADTGQGAFTGYSKDGYHTAKRDLLPKVFRELDKRGAKVMMSNADVPAIRSYFSDFNINVIKTNRQTGIQLSSITKEKIENTGKLNEVVVTNYKFGKGGKQTTIDDTWV*