ggKbase home page

L1_007_000M1_scaffold_69_58

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: 72061..73839

Top 3 Functional Annotations

Value Algorithm Source
Putative PTS system, lactose-specific IIC component n=2 Tax=Collinsella RepID=A4E8Y3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 592.0
  • Bit_score: 1151
  • Evalue 0.0
Putative PTS system, lactose-specific IIC component {ECO:0000313|EMBL:EBA39728.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 592.0
  • Bit_score: 1151
  • Evalue 0.0
PTS system, lactose-specific IIBC component similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 592.0
  • Bit_score: 629
  • Evalue 9.30e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1779
ATGGACGCCATCGTAAAGATGCTCGAAAAGCATCAACCGTTCTTTGAGAAGATCTCGAGGAACGTCTACCTCCAGGCCATTAAGGACGGATTCCTTGGGTGCATGCCCATCGTCCTCACCTCTTCGATCTTTCTGTTGATCGCCACCCTTCCTGGCGTAGTTGGCATCACGCTGCCCCAGCCGCTCATCGACTGGTGCAACAAGCTGTACAACTTCACCATGGGCGTCATGGGCATCATGGTTGCCGGCACCACTGCCAAGAACTTCACGGCGTCCATGAACCGTCGCATGCCCGCCGGCAAGGTGCTCAACGACGGCTCCACCATGGTTGCCGCCCAGTGCAGCATGCTGCTGCTCGCTGTTACGCAGTTCACCACCAAGTTCAACGGCTCCGAGCTTTCGGTCTTCGATTGCACCAGCATGGGTACGCGCGGTCTGTTCTCGGCCTATATCGCCGCATTCATTACCGTGTGGGTTTATAAGTTCTGCGTCTCGCGCGATCTGACCATTAAGCTGCCCAAGGAGGTTCCGGGCGCCATCGCTCAGAACTTCCGCGACATCATCCCCTTCGGTGGCGCTGTCATCATCTGCGGCATCATCGATGTCGTCGTGCGCAACCTCATGGGCGTTCCGTTCTCCGAGCTGCTCATCAAGCTGCTCTCCCCGCTCTTCACTGCGGCAGAAACCTATCCTGGCCTTATCCTTATTCAGGCAGCCACCGCGTTCTTCTGGTTCATCGGCGTCCACGGCCCCTCGATCGTCCAGCCGGGCATCGACCCCATCCGTCTTGCCAACCAGGCCGAGAACCTGCAGGTTCTGCTGGCCGGTGGCCACCCCGCCCACTCCCTCACCTTTAACATGTCGCTCGTGGGTGAGTTCGGCGGCACCGGCGCCACGTTCATCGTGCCGCTTCTGCTGATTCTCTTTATGAAGTCCAAGCAGCTCAAAGCCGTCGGTAAGGCCTCGATTGTTCCTGTTGCCTTTGCTGTCAACGAGCCGCTGCTCTTTGGCGCGCCGATGATCCTTAACCCCTACATGCTCATCCCCTTTGTTGCCGCCGGCTGCGTCAACGTAAGCGTTGCCAAGTTCTTTATCGACAACGTGGGCATGAACGGCTTCTCCTTCGTGGTGCCTTGGGCTACCCCTGCCCCCATCGGCATCTTCATCACCACGAACTTCCAGCTTATCGCCCTGGTGTTTGTCGCAATCATCATCTTGCTGGACGCCATCATCTACCTGCCGTTCTTGAAGGCATACGATAAGCTGCTCTGCGACCAGGAGGCCGAGCGCGCCGCCGAGCTGGGTCTCGAGTCCGATGGTGCTGCCGCCATCGCCGCCAGCACCTCTGCTCCCGCTGTCGAGCAGACCACCGCTTCCGTCGAGCCGACCGCCGCTGCCGCCGACAGCAAGCCTGTCGCCGATCAGCCCGAGCCCACCGCCGACGCATCCGCTAAGAAGGACGTCGACGGTCTGAAGGTCCTCGTCCTGTGCGCCGGCGCCGGCACCTCTGCCATGCTTGCCAACGCCATCAAGGAAGGTGCTGCGCAGACCGGAGAGAACATCGCTTCCTCCGCAGGCGCTTATGGTCAGCACACAGCCATCATGGATCAGTACGACGTCATCGTGCTCGCCCCGCAGGTTCGTAGCTACTACAACGACATGAAGGCCGACACCGATCGTCTGGGCATTAAGCTGCTCGCTCCCCGCGGCAAGGAATATATCGACCTTACCCGCGACCCCGCTGGCGCCATTAAATGGCTCCGCGAGAACCTCGACTAG
PROTEIN sequence
Length: 593
MDAIVKMLEKHQPFFEKISRNVYLQAIKDGFLGCMPIVLTSSIFLLIATLPGVVGITLPQPLIDWCNKLYNFTMGVMGIMVAGTTAKNFTASMNRRMPAGKVLNDGSTMVAAQCSMLLLAVTQFTTKFNGSELSVFDCTSMGTRGLFSAYIAAFITVWVYKFCVSRDLTIKLPKEVPGAIAQNFRDIIPFGGAVIICGIIDVVVRNLMGVPFSELLIKLLSPLFTAAETYPGLILIQAATAFFWFIGVHGPSIVQPGIDPIRLANQAENLQVLLAGGHPAHSLTFNMSLVGEFGGTGATFIVPLLLILFMKSKQLKAVGKASIVPVAFAVNEPLLFGAPMILNPYMLIPFVAAGCVNVSVAKFFIDNVGMNGFSFVVPWATPAPIGIFITTNFQLIALVFVAIIILLDAIIYLPFLKAYDKLLCDQEAERAAELGLESDGAAAIAASTSAPAVEQTTASVEPTAAAADSKPVADQPEPTADASAKKDVDGLKVLVLCAGAGTSAMLANAIKEGAAQTGENIASSAGAYGQHTAIMDQYDVIVLAPQVRSYYNDMKADTDRLGIKLLAPRGKEYIDLTRDPAGAIKWLRENLD*