ggKbase home page

L1_007_000M1_scaffold_86_28

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(39164..41005)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 613.0
  • Bit_score: 1229
  • Evalue 0.0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5E2_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 613.0
  • Bit_score: 1229
  • Evalue 0.0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 609.0
  • Bit_score: 1065
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides merdae CAG:48 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1842
ATGGAAGATTTTTTTAACTATCGTCGTCGCAAATCGTCTATTGTCAACATAGGAAATACTCCGTTAGGGGGCGATAATCCGATTCGCATCCAGTCGATGGCAAACGTCTCCACAATGGATACTGATGCGGCTGTCTGCCAGGCGATCCGAATGATCGAAGCCGGTGCAGAATATGTACGTTTCACCGCCCAAGGAGAACGTGAAGCCCGTAATTTAGGTGTAATCCGTAAACAACTTAGCGAAGCCGGATATACGACTCCGTTAGTCGCCGACATCCATTTTAACCCACGCGCGGCCGATGCTGCTGCCGAAGAGGTGGAAAAAGTACGTATCAACCCCGGAAATTATGTGGACAAGGTAAAGACGTTCGATCTGCAGGAATACACCGACGAGGAATATGCCGCAGAGTTACAGAAGATACGCGACCGCTTCATACCATTCCTTAACATCTGCAAAGCACACGGAACCGCCATTCGTATTGGCGTAAACCACGGTTCGCTGTCCGACCGAATTATGAGCCGGTACGGCGACACTCCAGAAGGCATGGTTGCCTCATGCATGGAATTCCTGCGTATTTGCCGGGATGAGAATTTTCCCGACGTCGTAATCTCCATTAAAGCCTCGAACACGGTTGTAATGGTGAAAACCGTCCGCCTATTAGTCCGAACAATGGAAGCCGAAGATATGTACTACCCGTTGCATCTCGGTGTGACGGAAGCTGGCGATGGCGAAGATGGACGCATCAAAAGCGCTGTCGGAATCGGGGCCCTATTGTCCGATGGCATCGGCGACACGATCCGCGTCTCTTTGAGCGAAGATCCGGAGGCAGAAATCCCTGTTGCCCGTAAGTTGGTTGACTACATACTCGAACGCGAAGGACATGAACCTGTAGAGACCTCACCTGCCCCCGGTTATGATCCGGTTACAGCCGATCGTCGTCACAGCCGGGTGACGGAAAGAATCGGGGGAAATTTCCCGCCGGTTGTCATTTCTGACCGTAGCAACGGTGATTTTGAGTTTGATCATGCGTCACAGCCGGACTATATATACATAGGCAAGGAAGATCCGGAGAACCTGCCGGACAACTTTCGTCTTTTGGTAGACGCCCACTTCTGGAAAGAACGTCCGAACGCCTATCCTTTTTTTATCGCATCGGAAATAGACGAGTTAAAAGACTATTCCGTTCCCTTGAAATTTATCCGCCTTACCTACCGAGATCTGACCGACCGCGTGATCGAAGTGCTGAAGCAGGATAAGTCCGTAATTGTCATCCTGAGCACACATCACCGGAACGGTATCGCCGCCGAACGTGCCGCCATGCATCACTTGCTGGCAGCCGGTTGTGATGTGCCGGTCATCCTGCATCGCGACTATAGAGAGACAGATATTGAAGCGTTGCAACTGAAAGCGGCCATCGACTTCGGAACTTTGCTGTTAGATGGCTTCGGCGACGGGATCATGCTGCACAACGAAGGGAGCGAAACGATGGTAACGGACAGTTGTATGTTCGGCATCCTGCAAGCAACCCGTACCCGCATCAGCAAGACGGAATATATCTCCTGCCCAAGTTGCGGACGTACCTTATACGACTTGCAAACAACAATCGCCCGTATCAAGAAAGCCACTTCTCATCTGAAAGGCTTGAAAATAGGTATCATGGGGTGTATCGTGAACGGTCCCGGCGAAATGGCAGATGCTGATTATGGCTATGTCGGCGCCGGAAAGAACCGGATCAGCCTATATAAAGGTAAAGAATGCGTCCTGAAAAATATCCCCGAAGAAGAAGCTGTAGAACGATTAGTCCAGTTGATAAAGGAAAGTGGAGATTGGACGGATCATTGA
PROTEIN sequence
Length: 614
MEDFFNYRRRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVCQAIRMIEAGAEYVRFTAQGEREARNLGVIRKQLSEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLQEYTDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCMEFLRICRDENFPDVVISIKASNTVVMVKTVRLLVRTMEAEDMYYPLHLGVTEAGDGEDGRIKSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILEREGHEPVETSPAPGYDPVTADRRHSRVTERIGGNFPPVVISDRSNGDFEFDHASQPDYIYIGKEDPENLPDNFRLLVDAHFWKERPNAYPFFIASEIDELKDYSVPLKFIRLTYRDLTDRVIEVLKQDKSVIVILSTHHRNGIAAERAAMHHLLAAGCDVPVILHRDYRETDIEALQLKAAIDFGTLLLDGFGDGIMLHNEGSETMVTDSCMFGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKKATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGKNRISLYKGKECVLKNIPEEEAVERLVQLIKESGDWTDH*