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L1_007_061G1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_434_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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239..913
DNA (675bp) protein (225aa)
Cyclic nucleotide-binding protein n=2 Tax=Clostridium butyricum RepID=M8JD89_CLOBU
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KHD14764.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
CRP (cyclic AMP receptor protein) regulatory protein
L1_007_061G1_scaffold_434_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1118..1288)
DNA (171bp) protein (57aa)
UPI0003D6399E related cluster n=1 Tax=unknown RepID=UPI0003D6399E
Uncharacterized protein {ECO:0000313|EMBL:KJZ89157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L1_007_061G1_scaffold_434_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1347..1661)
DNA (315bp) protein (105aa)
UPI0003D6399E related cluster n=1 Tax=unknown RepID=UPI0003D6399E
Uncharacterized protein {ECO:0000313|EMBL:KJZ89157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transposase IS4 family protein
L1_007_061G1_scaffold_434_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1733..2068
DNA (336bp) protein (112aa)
Transposase IS3/IS911 family protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHZ8_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:KHD13719.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transposase IS3/IS911 family protein
L1_007_061G1_scaffold_434_5

Not on your lists

2079..2198
DNA (120bp) protein (40aa)
Transposase {ECO:0000313|EMBL:ETJ35585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_061G1_scaffold_434_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2487..4070)
DNA (1584bp) protein (528aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Dorea sp. CAG:317 RepID=R6XLD4_9FIRM
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CDD07132.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ram2; alpha-L-rhamnosidase
L1_007_061G1_scaffold_434_7
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4079..5356)
DNA (1278bp) protein (426aa)
Disaccharride transporter, major facilitator super family (MFS) n=1 Tax=Lactobacillus plantarum ZJ316 RepID=M4KDB3_LACPN
sugar transport protein
RamP2 protein {ECO:0000313|EMBL:AGE37643.1}; TaxID=1284663 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum ZJ316.;"
L1_007_061G1_scaffold_434_8
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(5373..5603)
DNA (231bp) protein (77aa)
Phosphotransferase system HPr-related proteins n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CGA2_9FIRM
Phosphotransferase system, HPr-related proteins
Phosphotransferase system HPr-related proteins {ECO:0000313|EMBL:CDA64302.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L1_007_061G1_scaffold_434_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5625..6974)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RLB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18204.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
major facilitator superfamily protein
L1_007_061G1_scaffold_434_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7110..8153
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZYY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49317.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
transcriptional regulator AraC family
L1_007_061G1_scaffold_434_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8440..9732)
DNA (1293bp) protein (431aa)
Uracil permease n=3 Tax=Clostridium butyricum RepID=B1R0P8_CLOBU
Uracil-xanthine permease {ECO:0000313|EMBL:ENZ32287.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uracil transporter
L1_007_061G1_scaffold_434_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10453..11097
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52689.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_007_061G1_scaffold_434_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11197..11421
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002EF5739
Uncharacterized protein {ECO:0000313|EMBL:EHI99967.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L1_007_061G1_scaffold_434_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11464..11682
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQ64_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42663.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_434_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11933..12118
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TNK2_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23450.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L1_007_061G1_scaffold_434_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12374..13003)
DNA (630bp) protein (210aa)
Putative NADH-flavin reductase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56209.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative NADH-flavin reductase
L1_007_061G1_scaffold_434_17
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13147..13470
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C0D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58362.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hxlR-like helix-turn-helix family protein
L1_007_061G1_scaffold_434_18
unknown

Not on your lists

13474..13599
DNA (126bp) protein (42aa)

This feature has no annotations

L1_007_061G1_scaffold_434_19
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13675..15075)
DNA (1401bp) protein (467aa)
Glycoside hydrolase family protein n=1 Tax=Clostridium intestinale URNW RepID=U2N2Q8_9CLOT
Glycoside hydrolase family protein {ECO:0000313|EMBL:ERK29797.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
6-phospho-beta-glucosidase
L1_007_061G1_scaffold_434_20
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15103..16404)
DNA (1302bp) protein (434aa)
Cellobiose permease IIC component CelB n=1 Tax=Clostridium intestinale URNW RepID=U2PTQ5_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
PTS sugar transporter subunit IIA
L1_007_061G1_scaffold_434_21
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16419..17708)
DNA (1290bp) protein (430aa)
Glycoside hydrolase family 1 n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q8S4_CALH1
glycoside hydrolase family 1
Glycoside hydrolase family 1 {ECO:0000313|EMBL:ADQ08048.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
L1_007_061G1_scaffold_434_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17910..18713)
DNA (804bp) protein (268aa)
RpiR family transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2Q1J4_9CLOT
RpiR family transcriptional regulator {ECO:0000313|EMBL:ERK29919.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L1_007_061G1_scaffold_434_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18994..21006)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R423_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25066.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L1_007_061G1_scaffold_434_24
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(21044..21898)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Vibrio ordalii RepID=UPI00030EC7BB
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
L1_007_061G1_scaffold_434_25
unknown

Not on your lists

comp(22077..22181)
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_061G1_scaffold_434_26
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22175..22432)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y0K3_9CLOT
DNA polymerase III subunit beta {ECO:0000313|EMBL:KGM95435.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
DNA polymerase, beta domain-containing protein region
L1_007_061G1_scaffold_434_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22722..22940
DNA (219bp) protein (73aa)
HAD family hydrolase n=1 Tax=Clostridium botulinum CFSAN002367 RepID=S8CXL0_CLOBO
HAD family hydrolase {ECO:0000313|EMBL:EPS51897.1}; TaxID=1302425 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN002367.;"
HAD hydrolase, IA, variant 1 family protein
L1_007_061G1_scaffold_434_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23304..23750)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUV4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44564.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_061G1_scaffold_434_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23789..23953)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWR7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES49428.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L1_007_061G1_scaffold_434_30
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24255..24968)
DNA (714bp) protein (238aa)
Oleoyl-[acyl-carrier-protein] hydrolase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DM33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHS55658.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
oleoyl-ACP hydrolase
Displaying items 1-30 of 32 in total

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