ggKbase home page

L1_007_122G1_scaffold_490_15

Organism: L1_007_122G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: 12377..12679

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFR0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 94.0
  • Bit_score: 94
  • Evalue 3.80e-17
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG29689.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 94.0
  • Bit_score: 94
  • Evalue 5.30e-17
Helix-turn-helix. similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 77.0
  • Bit_score: 82
  • Evalue 4.20e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGCAATATCGGCATGCGGATAAAAGAATTACGTATTGGACGTAACCTGACACAGGCGGCATTGGGCAGAAAAATCAACCGCAGCAAAACTGTAATCAGCAATTATGAAATGGGTATCCGCATGCCTACGGTAGATTCCCTCTGTGAGTTGGCACTATTTTTCGGAGTTTCAGTCGACTATCTTCTGGGGTTGGAGAAACGCCGGATGCTGCCTATCGAGGGACTAAACACACGGCAGGTGGAAATTTTAACGATGCTGGCCTCAGAATTTAAAAATGAAAGCCGTAGTAAAAAGAAATAG
PROTEIN sequence
Length: 101
MSNIGMRIKELRIGRNLTQAALGRKINRSKTVISNYEMGIRMPTVDSLCELALFFGVSVDYLLGLEKRRMLPIEGLNTRQVEILTMLASEFKNESRSKKK*