ggKbase home page

L1_008_000G1_scaffold_89_2

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(1144..1683)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinomyces sp. ICM39 RepID=J2YNB9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 4.40e-93
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 6.20e-93
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 175.0
  • Bit_score: 247
  • Evalue 2.30e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinomyces sp. ICM39 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGACGAAGCGATGCCCCTCATGAACCAACTGTTCGGCGCGGCCCTGGGTATGACCCGCAATCGCGCCGACGCGGAGGACCTGGTCCAGGAGACCTACCTGAAGGCCTACCAGAAGTTCCACCAGTACAAGCCCGGCACCAACATCAAGGCCTGGCTCTACCGGATCCTCACCAACACCTACATCACCAGCTACCGCAAGGCACAGCGCTCTCCCAAGCGCGCCTCCAGCGACACCGTCGAGGACTGGCAGCTCGCCGACGCAGCCTCCCACTCGGAGGTCGGCCTCAAATCCGCAGAAGTCGAGGCCCTCGAATCGCTGCCCTCCTCGCAGCTGCGCGACGCCCTCGATTCGCTCTCAGAGGAACACCGGATGGTTGTCCTCATGGCTGACGTTGAAGGTATGAGCTACAAGGAAATCGCCGAAGAACTAGGAGTTCCCATGGGGACCGTCATGAGCCGACTGAACCGGGCGCGCAAGAACCTGCGCTCCGCGCTGGCCGACGTCGCCGCGGAATACGGGATCGGAGGGGCCAAGTGA
PROTEIN sequence
Length: 180
MDEAMPLMNQLFGAALGMTRNRADAEDLVQETYLKAYQKFHQYKPGTNIKAWLYRILTNTYITSYRKAQRSPKRASSDTVEDWQLADAASHSEVGLKSAEVEALESLPSSQLRDALDSLSEEHRMVVLMADVEGMSYKEIAEELGVPMGTVMSRLNRARKNLRSALADVAAEYGIGGAK*