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L1_008_000G1_public_UNK

In projects: L1_008_000G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 242.07 Longest contig: 624.77 Kbp Bin length: 148.08 Mbp GC content: 46.61 %
Contigs count: 22344 Features count: 153263 rRNAs count: 18 tRNAs count: 2071

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Displaying items 301-350 of 22344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L1_008_000G1_scaffold_10525
Species: Ruminococcaceae bacterium D16 (60%)
5 2290 bp 43.71 6.03 100.61
L1_008_000G1_scaffold_14315
Species: [Clostridium] innocuum (50%)
2 1637 bp 46.37 6.23 100.61
L1_008_000G1_scaffold_8322
Species: Escherichia coli (100%)
3 2955 bp 51.84 36.80 100.61
L1_008_000G1_scaffold_19777
Species: human gut metagenome (50%)
2 1151 bp 33.45 5.73 100.61
L1_008_000G1_scaffold_19731
Species: Bacteroides fragilis (50%)
2 1154 bp 32.50 939.38 100.61
L1_008_000G1_scaffold_9223
Species: Enterococcus faecium (100%)
3 2648 bp 41.13 3.97 100.60
L1_008_000G1_scaffold_11955
Species: Candidatus Saccharibacteria oral taxon TM7x (100%)
4 1998 bp 44.69 5.41 100.60
L1_008_000G1_scaffold_22201
Species: Streptococcus mitis (50%)
2 1008 bp 36.90 4.32 100.59
L1_008_000G1_scaffold_22150
Species: [Clostridium] innocuum (50%)
2 1011 bp 49.26 4.45 100.59
L1_008_000G1_scaffold_21965
Species: Candidatus Saccharibacteria oral taxon TM7x (100%)
3 1020 bp 42.55 5.74 100.59
L1_008_000G1_scaffold_13783
Species: Haemophilus parainfluenzae (50%)
2 1709 bp 37.92 19.66 100.59
L1_008_000G1_scaffold_10819
Species: Erysipelotrichaceae bacterium 6_1_45 (80%)
5 2225 bp 41.12 4.38 100.58
L1_008_000G1_scaffold_15199
Species: Candidatus Saccharibacteria oral taxon TM7x (100%)
2 1542 bp 43.71 5.64 100.58
L1_008_000G1_scaffold_36320
Species: Haemophilus parainfluenzae (100%)
2 1029 bp 42.18 146.06 100.58
L1_008_000G1_scaffold_12497
Species: Escherichia coli (100%)
3 1906 bp 53.36 6.22 100.58
L1_008_000G1_scaffold_6797
Genus: Enterobacter (100%)
3 3645 bp 58.96 25.27 100.58
L1_008_000G1_scaffold_16744
Species: Streptococcus mitis (100%)
2 1393 bp 44.58 8.18 100.57
L1_008_000G1_scaffold_21432 2 1050 bp 40.00 4.43 100.57
L1_008_000G1_scaffold_21374
Species: Streptococcus mitis (100%)
2 1053 bp 43.30 6.27 100.57
L1_008_000G1_scaffold_21387
Species: Streptococcus sp. SK643 (50%)
2 1053 bp 36.85 5.41 100.57
L1_008_000G1_scaffold_18680
Species: Clostridium perfringens (100%)
2 1229 bp 29.78 4.52 100.57
L1_008_000G1_scaffold_13422
Species: [Clostridium] innocuum (50%)
4 1763 bp 50.60 5.28 100.57
L1_008_000G1_scaffold_14767
Species: Haemophilus parainfluenzae (50%)
2 1590 bp 33.21 4.25 100.57
L1_008_000G1_scaffold_14712
Order: Clostridiales (75%)
4 1596 bp 47.43 4.61 100.56
L1_008_000G1_scaffold_21016
Species: Bacteroides vulgatus (100%)
2 1074 bp 47.77 2006.56 100.56
L1_008_000G1_scaffold_9613
Species: Staphylococcus sp. DORA_6_22 (75%)
4 2530 bp 35.38 5.75 100.55
L1_008_000G1_scaffold_14389
Species: Erysipelotrichaceae bacterium 2_2_44A (50%)
2 1629 bp 42.91 6.54 100.55
L1_008_000G1_scaffold_18117
Species: Clostridium phage phiCT9441A (50%)
2 1274 bp 30.85 5.65 100.55
L1_008_000G1_scaffold_10929
Species: Streptococcus parasanguinis (100%)
3 2202 bp 46.73 8.92 100.55
L1_008_000G1_scaffold_2764
Order: Clostridiales (100%)
11 9548 bp 47.36 502.49 100.55
L1_008_000G1_scaffold_11631
Species: Streptococcus mitis (100%)
3 2059 bp 44.34 7.36 100.53
L1_008_000G1_scaffold_9941
Species: Streptococcus sp. C150 (50%)
2 2435 bp 32.20 4.99 100.53
L1_008_000G1_scaffold_15550
Species: Streptococcus parasanguinis (66.67%)
3 1504 bp 44.75 6.58 100.53
L1_008_000G1_scaffold_13796
Species: Peptoclostridium difficile (50%)
2 1707 bp 47.92 6.24 100.53
L1_008_000G1_scaffold_17442
Species: [Clostridium] asparagiforme (50%)
2 1328 bp 51.13 3.39 100.53
L1_008_000G1_scaffold_19857
Species: Enterococcus faecium (100%)
2 1146 bp 40.84 4.71 100.52
L1_008_000G1_scaffold_19716
Species: Bacteroides fragilis (50%)
2 1155 bp 36.10 960.91 100.52
L1_008_000G1_scaffold_17167
Species: Veillonella sp. ACP1 (50%)
2 1352 bp 41.86 27.96 100.52
L1_008_000G1_scaffold_13531
Species: Streptococcus parasanguinis (100%)
2 1743 bp 43.83 7.66 100.52
L1_008_000G1_scaffold_9633
Species: Haemophilus parainfluenzae (66.67%)
3 2525 bp 40.59 34.04 100.52
L1_008_000G1_scaffold_15096
Species: Methanoplanus limicola (50%)
2 1555 bp 31.58 4.34 100.51
L1_008_000G1_scaffold_8942
Species: Flavonifractor plautii (50%)
4 2752 bp 62.50 5.78 100.51
L1_008_000G1_scaffold_16759
Species: Streptococcus parasanguinis (100%)
2 1391 bp 31.85 3.13 100.50
L1_008_000G1_scaffold_14732
Species: Lachnospiraceae bacterium 2_1_58FAA (66.67%)
3 1594 bp 48.06 100.13 100.50
L1_008_000G1_scaffold_14738
Species: Lachnospiraceae bacterium 2_1_58FAA (66.67%)
3 1594 bp 48.18 376.69 100.50
L1_008_000G1_scaffold_19056
Species: Streptococcus parasanguinis (100%)
3 1203 bp 39.40 5.36 100.50
L1_008_000G1_scaffold_18801
Species: Veillonella sp. 6_1_27 (50%)
2 1221 bp 44.64 12.04 100.49
L1_008_000G1_scaffold_11764
Species: Streptococcus parasanguinis (100%)
3 2036 bp 41.50 6.41 100.49
L1_008_000G1_scaffold_11678
Species: Streptococcus parasanguinis (50%)
2 2051 bp 42.47 64.72 100.49
L1_008_000G1_scaffold_8533
Species: Streptococcus sp. HSISS3 (66.67%)
3 2881 bp 38.32 171.24 100.49
Displaying items 301-350 of 22344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.