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L1_008_241G1_scaffold_161_30

Organism: L1_008_241G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(39056..40480)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=14 Tax=Bifidobacterium RepID=B3DR99_BIFLD similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 474.0
  • Bit_score: 927
  • Evalue 2.80e-267
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 474.0
  • Bit_score: 927
  • Evalue 7.80e-268
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 474.0
  • Bit_score: 927
  • Evalue 3.90e-267

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Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
TTGGCCACGAAGGAAACGACGGCAACCAAGCAGACAGCCGAGTCCAGCGAGGAGACCGAGACCAAGAAGAAGGCCAGCTCTACGACCACCGCACGCAAGACTTCCGCCAAGAAGTCCAAGTCCGCAGAGCCCTCGAAAAAGACCACGCGCAAGTCCGCTGCGAAGAAAACCGCGAAGAAGGCCAAGGACGATGAGCTCGTCAAAGACGAGGACACTCAGGTCGATGACGAGCTTGATGACGATGCCGAGGTCAACGACGACGATTTGGACGTTGACGATCTCGACGAGGATCTTGACGACGTTGACGAAGACGATGCCGACGACGAAGACCTCGATGATGACGATGCCGACGACGATGATGTGGAAGACGACGAGGACGAGGAAGAAGCCAAGTCCAAGGCACCCGAGCAGCCCAAGGAAAAGGGTGCCTACGTGGTCTCCGACACGGATGATGAGGAAGAAAACATCATCCCCTCGGGCAATCCGAAGCGTCGTGTGATTGCGGCCGGCGCAACCGCCGACCCGGTCAAGGACTACCTGAAGCAGATCGGCCGTGTGAGCCTGCTGAATGCCGAGCAGGAAGTCGACCTGTCCGAGCGCATCGAGGCCGGCCTGTACGCCCAGCACCTGCTCGACACCGAAAGCGAAGGCATGGAGTTCAAGCGCAAGCGTGAACTCAAGTGGGCCGCCGCCGACGGCAAGAAGGCTAAGGACCATCTGCTGGAAGCCAACCTACGACTTGTGGTCTCGCTCGCCAAGCGCTACACGGGTCGCGGCATGCTCTTCCTTGATTTGATCCAGGAAGGCAACCTTGGTCTGATTCGTGCCGTCGAGAAGTTCGACTGGAAGAAGGGCTTCAAGTTCTCCACCTACGCCACGTGGTGGATTCGTCAGGCCATCACCCGTGCCATGGCCGATCAGGCCCGCACCATTCGCGTGCCTGTGCACATGGTCGAAGTGATTAACAAGCTGTCCCGTGTACAGCGCCAGATGCTGCAGGATCTGGGGCGTGAACCTACGCCGGACGAGCTGGCCCGCGAGCTGGATATGCCGGTTGAGAAGGTGCAGGAAGTGCAGAAGTACGGCCGCGAGCCGATTTCCCTGCACACCCCGCTTGGCGAGGATGGCGATTCCGAGTTCGGTGACCTCATTGAGGATACCGACGCCATCGCTCCGTCCGACGCCGTGGCCTTCTCCCTGCTGCAGGAACAGTTCAAGCAGGTGCTGGAAACCCTGTCTCCGCGTGAGGCCGGCGTCATCAAGATGCGCTATGGCCTGGAAGACGGCCAGCCGAAGACGCTGGACGACATCGGCCGTGTGTATGGCGTGACCCGTGAACGCATCCGTCAGATCGAGTCCAAGACCATGTCCAAGCTGCGCCACCCATCCCGTTCGCAGACCCTGCGCGACTTCCTGGATCAATGA
PROTEIN sequence
Length: 475
LATKETTATKQTAESSEETETKKKASSTTTARKTSAKKSKSAEPSKKTTRKSAAKKTAKKAKDDELVKDEDTQVDDELDDDAEVNDDDLDVDDLDEDLDDVDEDDADDEDLDDDDADDDDVEDDEDEEEAKSKAPEQPKEKGAYVVSDTDDEEENIIPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTESEGMEFKRKRELKWAAADGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ*