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L2_013_122G1_scaffold_123_28

Organism: L2_013_122G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 36861..40709

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 1282.0
  • Bit_score: 2529
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 1289.0
  • Bit_score: 2300
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=2 Tax=Clostridium RepID=B6FLB3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 1282.0
  • Bit_score: 2529
  • Evalue 0.0

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Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3849
ATGGAGAAAAACAGAATTCGTCCCATCACAAACGGAAAAAGTTCGCGTATGAGCTATGCAAGGCAAAAAGAAGTATTACAGATGCCGAATTTAATTGAAGTTCAGAAAGATTCTTATCAGTGGTTTCTGGACGCAGGATTAAAAGAAGTGTTTGAAGATATTTCACCAATCTCTGACTACAGCGGTCATCTGAGCCTTGAGTTCGTAGATTTTACACTATGCGAAGATGATGTAAAGTACACCATCGAGGAATGCAAAGAGCGTGATGCAACTTACGCGGCACCTTTGAAAGTGAGAGTAAGACTTTATAATAAAGAAACAGATGAAATTAACGAGCACGAGATTTTCATGGGAGATCTTCCGCTTATGACAGCGACAGGTACTTTTGTGATTAATGGTGCTGAACGTGTTATTGTAAGTCAGTTAGTTCGCTCTCCTGGAATCTACTATGCAATCGCGCACGACAAAGTAGGTAAAGAATTATATTCTTCTACAGTAATCCCAAATCGTGGTGCATGGTTAGAGTATGAGACAGATTCGAATGACGTATTTTACGTTCGTGTTGATAGAACAAGAAAAGTACCGATTACAGTGTTGATTCGTGCACTTGGTATCGGAACAAATCCAGAGATCTTAGAACTGTTCGGTGAAGAACCTAAGATTTTAGCAAGCTTTGGAAAGGACGTTGCTGAGAATTATCAGGAAGGTCTATTAGAGTTATACAAAAAGATTCGTCCGGGTGAGCCTCTTGCGGTGGACAGTGCAGAGAGCCTTATCACAAGCATGTTCTTTGATGCAAGACGTTATGACCTTGCAAAAGTAGGACGTTACAAATTCAATAAGAAGTTAGCACTTCAAAACCGTATCACAGGTCAGGTATTGGCAGAGGATGTTGTGAATGCCATCACAGGTGAAGTGATTGCTGAAAAAGGTGAGAAATTATCGAGAGAAAAAGCGACAGCAATCCAGAATGCGGCTGTTCCATATGTATGGATTGACGTAGAAGGTGAGGAACGTAATATCAAAGTGCTTTCTAATATGATGGTGGATTTGGGAGCGGTTGTAGATATTGATCCAGAAGAGGTTGGCGTGACAGAGGCAGTGTACTATCCGGTGCTTGCTGGATTATTAGAAGAAACAGCTGGGGACATTGACGAATTAAAAGAAGAGATCCATAAAAATATACATGAATTGATTCCAAAACATATTACAAAAGAAGATATTTTAGCGTCTATCAACTATAATATTCATTTGGAATATGGAATGGGAACAGATGACGACATCGACCACTTAGGTAACAGGCGTATCCGTGCGGTTGGAGAATTACTACAGAACCAGTACAGAATCGGTCTGTCAAGATTGGAAAGAGTGGTTCGTGAGAGAATGACGACTCAGGACTTAGAGGGAGTTTCACCACAGTCATTGATTAATATCAAACCGGTAACAGCAGCTGTAAAAGAATTCTTTGGTTCTTCACAGCTGTCACAGTTCATGGATCAGAACAACCCTCTTGGCGAGTTGACGCATAAGAGACGTTTGTCTGCACTTGGTCCAGGTGGTCTTTCAAGAGACAGAGCTGGATTTGAGGTGCGCGACGTGCATTATTCTCACTACGGAAGAATGTGTCCTGTTGAGACACCGGAAGGTCCTAACATCGGTCTGATTAACTCGCTTGCGACTTATGCGAGAATCAATCAGTATGGTTTTATTGAAGCACCATACCGTAAGATCGACAAGACAGATCCGAAGAATCCGGTTGTGACAGAAGAAGTAGTTTACATGACAGCAGATGAAGAAGATAACTATCATGTGGCGCAGGCTAATGAACCTCTTGATGCAGAGGGACATTTTATTCACAAAAATGTGGCTGGTCGTTATCGTGAAGAGACACAGGAATATGAAAGAACAGCATTTGATTACATGGATGTATCACCGAAGATGGTATTTTCCGTGGCGACAGCGCTGATTCCGTTCCTTGAAAATGATGACCCTACCCGTGCGCTTATGGGATCAAACATGCAGCGACAGGCGGTGCCTCTTATGATGACAGAAGCTCCGGTTATCGGTACAGGTATTGAGACAACAGCAGCGGTAGACTCTGGTGTATGTATTGTGGCAGAGCAGGCTGGTGTGATCGAGCGTTCTACTTCGAAAGAGATTGTTGTAAAGCATGATGATGGAACAAAGAAAACATATAAATTGACAAAATTTTTGCGCAGTAACCAGAGTAACTGCTACAACCAAAGACCAATCGTTGTCAAAGGGGAAAAAGTAGAAGCCGGACAGGTGATCGCAGATGGTCCTTCGACATCTAATGGTGAGATGGCTCTTGGTAAGAACCCATTGATCGGTTTCATGACATGGGAAGGTTATAACTACGAGGATGCTGTATTACTGAGTGAAAGATTAGTACAGGATGATGTGTATACATCTATTCATATTGAAGAGTATGAGGCGGAGGCGCGCGATACGAAATTAGGACCTGAGGAGATTACACGTGATATTCCGGGGGTCGGTGATGATGCGCTTAGAGATCTGGATGATAGAGGTATTATTCGTATTGGTGCAGAGGTTCGTGCAGGGGATATCTTAGTTGGTAAAGTAACTCCGAAGGGAGAGACAGAACTGACAGCAGAAGAGAGATTACTTCGTGCAATCTTTGGAGAAAAAGCAAGAGAAGTAAGGGATACTTCCCTGAAAGTACCTCACGGAGAATATGGTATCGTTGTAGATGCGAAAGTATTTACAAGAGAGAACGGTGATGAGCTTTCACCAGGAGTAAACCAGGCAGTTCGTATTTATATCGCGCAGAAGAGAAAGATTTCTGTTGGTGATAAGATGGCTGGTCGTCACGGTAACAAGGGTGTTGTTTCCCGTGTACTTCCTGTAGAAGATATGCCATTCCTTCCAAACGGACGTCCGCTTGATATCGTGTTGAATCCGCTTGGTGTGCCGTCGCGTATGAATATCGGACAGGTGCTTGAGATTCACTTGAGTCTTGCAGCGAAGGCACTTGGATTTAATATCGCAACACCAGTATTCGATGGTGCGAACGAGATCGATATTATGGATACATTAGATCTGGCAAATGACTATGTAAATCTTGAATGGGAAGAGTTCGAGAAGAAACATGGTGAAGAGTTACTTTCGGAAGTATTACAGTATTTATCAGATAACAGAGAACACAGAAAATTGTGGAAAGGTGTTCCGCTGTCACGTGATGGTAAAGTTCGTCTTCGTGATGGACGTACAGGAGAATACTTTGACAGCCCTGTTACAATCGGACACATGCACTATCTGAAACTGCACCACTTAGTAGACGATAAGATTCATGCTCGTTCTACTGGTCCTTACTCACTGGTAACACAACAGCCGTTAGGTGGTAAGGCTCAGTTTGGTGGACAGAGATTCGGAGAGATGGAAGTTTGGGCACTGGAAGCATATGGTGCATCATATACATTACAGGAGATCTTAACTGTGAAATCGGATGATGTTGTTGGTCGTGTGAAGACATACGAAGCAATCATCAAAGGAGATAATATACCAGAACCGGGTATTCCGGAATCATTCAAGGTACTCCTGAAAGAACTTCAGTCATTGGGACTTGATGTGAGAGTATTGCGTGAAGATCAGACAGAAGTTGAGATTATGGAGACAATCGATTACGGTGAAACAGATTTACACTCCATTATTGAAGGAGATAGAAAGTATAACTCTGAGAATGAATCTTATGGAGAGCATGGCTTCAGCCAACAGGAATTTGCAGGTGAAGAGCTTGTGGACGTAGAGGAAGAGGAATTTGAAGAACCGGATGACATCGATTTTGACGATATGTTAGACGAAGAATAG
PROTEIN sequence
Length: 1283
MEKNRIRPITNGKSSRMSYARQKEVLQMPNLIEVQKDSYQWFLDAGLKEVFEDISPISDYSGHLSLEFVDFTLCEDDVKYTIEECKERDATYAAPLKVRVRLYNKETDEINEHEIFMGDLPLMTATGTFVINGAERVIVSQLVRSPGIYYAIAHDKVGKELYSSTVIPNRGAWLEYETDSNDVFYVRVDRTRKVPITVLIRALGIGTNPEILELFGEEPKILASFGKDVAENYQEGLLELYKKIRPGEPLAVDSAESLITSMFFDARRYDLAKVGRYKFNKKLALQNRITGQVLAEDVVNAITGEVIAEKGEKLSREKATAIQNAAVPYVWIDVEGEERNIKVLSNMMVDLGAVVDIDPEEVGVTEAVYYPVLAGLLEETAGDIDELKEEIHKNIHELIPKHITKEDILASINYNIHLEYGMGTDDDIDHLGNRRIRAVGELLQNQYRIGLSRLERVVRERMTTQDLEGVSPQSLINIKPVTAAVKEFFGSSQLSQFMDQNNPLGELTHKRRLSALGPGGLSRDRAGFEVRDVHYSHYGRMCPVETPEGPNIGLINSLATYARINQYGFIEAPYRKIDKTDPKNPVVTEEVVYMTADEEDNYHVAQANEPLDAEGHFIHKNVAGRYREETQEYERTAFDYMDVSPKMVFSVATALIPFLENDDPTRALMGSNMQRQAVPLMMTEAPVIGTGIETTAAVDSGVCIVAEQAGVIERSTSKEIVVKHDDGTKKTYKLTKFLRSNQSNCYNQRPIVVKGEKVEAGQVIADGPSTSNGEMALGKNPLIGFMTWEGYNYEDAVLLSERLVQDDVYTSIHIEEYEAEARDTKLGPEEITRDIPGVGDDALRDLDDRGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGEYGIVVDAKVFTRENGDELSPGVNQAVRIYIAQKRKISVGDKMAGRHGNKGVVSRVLPVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNIATPVFDGANEIDIMDTLDLANDYVNLEWEEFEKKHGEELLSEVLQYLSDNREHRKLWKGVPLSRDGKVRLRDGRTGEYFDSPVTIGHMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEILTVKSDDVVGRVKTYEAIIKGDNIPEPGIPESFKVLLKELQSLGLDVRVLREDQTEVEIMETIDYGETDLHSIIEGDRKYNSENESYGEHGFSQQEFAGEELVDVEEEEFEEPDDIDFDDMLDEE*