ggKbase home page
Advanced Search
Search Help

L2_022_000M1_public_UNK

In projects: L2_022_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 51.98 Longest contig: 506.74 Kbp Bin length: 82.39 Mbp GC content: 46.80 %
Contigs count: 13677 Features count: 81750 rRNAs count: 15 tRNAs count: 1007

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Displaying items 13301-13350 of 13677 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_022_000M1_scaffold_7372
Species: Ruminococcus sp. SR1/5 (50%)
2 1546 bp 44.24 4.08 100.32
L2_022_000M1_scaffold_5784
Species: Clostridium sp. BL8 (100%)
2 1848 bp 50.92 3.25 100.33
L2_022_000M1_scaffold_7450
Species: Clostridium sp. CAG:217 (50%)
2 1534 bp 42.76 4.69 100.33
L2_022_000M1_scaffold_10208
Species: human gut metagenome (100%)
2 1226 bp 55.79 8.32 100.33
L2_022_000M1_scaffold_10285
Species: Bilophila sp. 4_1_30 (50%)
2 1220 bp 61.56 3.93 100.33
L2_022_000M1_scaffold_7708
Species: Bilophila wadsworthia (66.67%)
3 1495 bp 67.22 3.71 100.33
L2_022_000M1_scaffold_10579
Species: Ruminococcus sp. SR1/5 (50%)
2 1193 bp 42.92 8.55 100.34
L2_022_000M1_scaffold_7754
Species: Clostridium sp. CAG:62 (50%)
2 1489 bp 52.05 4.73 100.34
L2_022_000M1_scaffold_10601
Species: human gut metagenome (50%)
2 1190 bp 44.62 3.78 100.34
L2_022_000M1_scaffold_6175
Species: Clostridium sp. CAG:678 (50%)
2 1752 bp 55.59 5.14 100.34
L2_022_000M1_scaffold_10955
Species: Bacteroides uniformis (50%)
2 1163 bp 34.74 60.88 100.34
L2_022_000M1_scaffold_6387
Species: Ruminococcus torques CAG:61 (66.67%)
3 1710 bp 44.62 4.74 100.35
L2_022_000M1_scaffold_8342
Species: Clostridium sp. SS2/1 (50%)
2 1414 bp 38.76 3.61 100.35
L2_022_000M1_scaffold_11444
Species: Ruminococcus torques CAG:61 (100%)
2 1130 bp 38.85 5.84 100.35
L2_022_000M1_scaffold_6469
Phylum: Firmicutes (66.67%)
3 1695 bp 48.20 5.40 100.35
L2_022_000M1_scaffold_11531
Species: Erysipelotrichaceae bacterium 2_2_44A (50%)
2 1124 bp 40.04 3.34 100.36
L2_022_000M1_scaffold_11877
Species: [Ruminococcus] gnavus (100%)
2 1100 bp 46.91 2.73 100.36
L2_022_000M1_scaffold_11879 2 1100 bp 40.91 5.18 100.36
L2_022_000M1_scaffold_8676
Species: Ruminococcus lactaris (50%)
2 1375 bp 53.89 6.11 100.36
L2_022_000M1_scaffold_12018
Species: Desulfovibrio vulgaris (50%)
2 1091 bp 65.26 3.02 100.37
L2_022_000M1_scaffold_12070
Species: Blautia obeum (100%)
2 1088 bp 44.85 3.03 100.37
L2_022_000M1_scaffold_5590
Species: Lachnospiraceae bacterium 7_1_58FAA (100%)
4 1898 bp 60.96 3.79 100.37
L2_022_000M1_scaffold_3010
Genus: Butyrivibrio (66.67%)
3 3216 bp 45.77 5.27 100.37
L2_022_000M1_scaffold_6953
Species: Ruminococcus torques CAG:61 (100%)
3 1608 bp 39.68 4.01 100.37
L2_022_000M1_scaffold_7072
Species: Ruminococcus torques CAG:61 (100%)
2 1590 bp 42.01 7.36 100.38
L2_022_000M1_scaffold_7101
Species: Ruminococcus sp. CAG:563 (50%)
2 1587 bp 54.00 3.02 100.38
L2_022_000M1_scaffold_12748
Species: Oscillibacter sp. 1-3 (50%)
2 1049 bp 62.44 4.29 100.38
L2_022_000M1_scaffold_12790
Species: Faecalibacterium prausnitzii (100%)
2 1046 bp 65.11 4.02 100.38
L2_022_000M1_scaffold_12832
Species: Coprococcus catus (50%)
2 1043 bp 38.64 5.18 100.38
L2_022_000M1_scaffold_12998
Species: Dialister invisus (66.67%)
3 1034 bp 37.81 2.76 100.39
L2_022_000M1_scaffold_13109
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1028 bp 46.50 6.57 100.39
L2_022_000M1_scaffold_9656
Species: Blautia sp. CAG:37 (100%)
2 1276 bp 44.83 4.47 100.39
L2_022_000M1_scaffold_6269
Species: RBG_13_Pacearchaeota_36_9_curated (50%)
2 1733 bp 40.16 4.24 100.40
L2_022_000M1_scaffold_10520
Species: Lachnospiraceae bacterium 8_1_57FAA (100%)
2 1198 bp 41.40 4.51 100.42
L2_022_000M1_scaffold_6585
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1670 bp 43.17 4.49 100.42
L2_022_000M1_scaffold_10970
Species: Sutterella sp. CAG:521 (50%)
2 1162 bp 37.87 5.81 100.43
L2_022_000M1_scaffold_11044
Species: Bifidobacterium bifidum (50%)
2 1156 bp 68.08 2.85 100.43
L2_022_000M1_scaffold_8684
Species: Clostridium sp. CAG:7 (50%)
2 1374 bp 44.32 5.68 100.44
L2_022_000M1_scaffold_3972
Species: Lachnospiraceae bacterium 3_1_46FAA (66.67%)
3 2506 bp 48.04 6.88 100.44
L2_022_000M1_scaffold_11323
Species: Ruminococcus sp. SR1/5 (50%)
2 1138 bp 44.90 3.56 100.44
L2_022_000M1_scaffold_11568
Genus: Bilophila (66.67%)
3 1120 bp 63.39 5.63 100.45
L2_022_000M1_scaffold_3681
Species: Bacteroides xylanisolvens (100%)
3 3130 bp 46.96 4.84 100.45
L2_022_000M1_scaffold_11672
Species: Dialister invisus CAG:218 (100%)
2 1114 bp 49.19 5.39 100.45
L2_022_000M1_scaffold_11728
Species: Blautia obeum (100%)
2 1111 bp 43.74 3.78 100.45
L2_022_000M1_scaffold_9236
Species: Dorea longicatena (50%)
2 1317 bp 45.79 4.10 100.46
L2_022_000M1_scaffold_9566
Species: Lachnospiraceae bacterium 8_1_57FAA (100%)
2 1284 bp 40.97 8.76 100.47
L2_022_000M1_scaffold_2634
Species: Blautia sp. CAG:37 (100%)
2 3625 bp 51.67 6.37 100.47
L2_022_000M1_scaffold_12496
Species: Lachnospiraceae bacterium 3_1_46FAA (50%)
2 1063 bp 41.96 8.04 100.47
L2_022_000M1_scaffold_9771
Species: Lachnospiraceae bacterium 7_1_58FAA (100%)
2 1263 bp 37.45 19.12 100.48
L2_022_000M1_scaffold_9778
Species: Dialister sp. CAG:486 (50%)
2 1263 bp 49.01 3.56 100.48
Displaying items 13301-13350 of 13677 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.