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L2_022_000M1_public_UNK

In projects: L2_022_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 51.98 Longest contig: 506.74 Kbp Bin length: 82.39 Mbp GC content: 46.80 %
Contigs count: 13677 Features count: 81750 rRNAs count: 15 tRNAs count: 1007

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Displaying items 13351-13400 of 13677 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_022_000M1_scaffold_8049
Species: Lachnospiraceae bacterium 28-4 (50%)
2 1451 bp 58.44 4.34 100.48
L2_022_000M1_scaffold_10062
Species: Parabacteroides johnsonii (100%)
2 1239 bp 37.93 19.25 100.48
L2_022_000M1_scaffold_2665
Species: Bacteroides sp. D2 (50%)
4 5347 bp 40.73 128.93 100.49
L2_022_000M1_scaffold_10223
Species: Ruminococcus torques CAG:61 (50%)
2 1224 bp 52.37 6.13 100.49
L2_022_000M1_scaffold_13446
Species: Pelosinus fermentans (100%)
2 1009 bp 42.42 3.87 100.50
L2_022_000M1_scaffold_3454
Species: Ruminococcus obeum CAG:39 (50%)
2 2818 bp 42.09 5.32 100.50
L2_022_000M1_scaffold_4670
Species: Eubacterium plexicaudatum (50%)
4 2206 bp 59.93 5.58 100.50
L2_022_000M1_scaffold_4683
Order: Clostridiales (100%)
3 2200 bp 60.50 4.36 100.50
L2_022_000M1_scaffold_10527
Species: Parabacteroides johnsonii (100%)
2 1197 bp 37.68 19.42 100.50
L2_022_000M1_scaffold_10535 3 1197 bp 65.00 4.14 100.50
L2_022_000M1_scaffold_8753
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1367 bp 46.09 7.46 100.51
L2_022_000M1_scaffold_5452
Species: Bacteroides ovatus (75%)
4 1937 bp 48.12 3.56 100.52
L2_022_000M1_scaffold_4846
Species: [Clostridium] saccharolyticum (50%)
2 2125 bp 38.12 7.20 100.52
L2_022_000M1_scaffold_5480
Species: [Clostridium] symbiosum (50%)
6 1931 bp 40.60 15.46 100.52
L2_022_000M1_scaffold_11112
Species: Anaerotruncus sp. G3(2012) (50%)
2 1152 bp 49.83 3.39 100.52
L2_022_000M1_scaffold_9203
Species: Blautia obeum (50%)
2 1322 bp 43.80 5.79 100.53
L2_022_000M1_scaffold_11597
Species: Subdoligranulum variabile (100%)
2 1119 bp 64.97 4.56 100.54
L2_022_000M1_scaffold_1707
Species: butyrate-producing bacterium SS3/4 (100%)
6 6144 bp 49.10 6.23 100.54
L2_022_000M1_scaffold_11640
Species: Roseburia hominis (50%)
2 1116 bp 40.68 3.49 100.54
L2_022_000M1_scaffold_3264
Order: Clostridiales (100%)
3 2972 bp 49.43 74.75 100.54
L2_022_000M1_scaffold_5086
Species: Coprococcus catus (50%)
2 2041 bp 46.74 23.66 100.54
L2_022_000M1_scaffold_5778
Species: Lachnospiraceae bacterium CAG:25 (66.67%)
3 1850 bp 35.73 3.08 100.54
L2_022_000M1_scaffold_7972
Species: Lachnospiraceae bacterium 3-2 (100%)
2 1462 bp 41.52 4.31 100.55
L2_022_000M1_scaffold_9649
Species: Blautia sp. KLE 1732 (100%)
2 1277 bp 44.32 11.39 100.55
L2_022_000M1_scaffold_12009
Species: [Ruminococcus] torques (50%)
2 1092 bp 39.56 4.26 100.55
L2_022_000M1_scaffold_12047
Species: Faecalibacterium sp. CAG:82 (50%)
2 1089 bp 66.67 5.23 100.55
L2_022_000M1_scaffold_12157
Species: Eubacterium sp. CAG:274 (50%)
2 1083 bp 45.15 3.60 100.55
L2_022_000M1_scaffold_12199
Species: Aminobacterium colombiense (50%)
2 1080 bp 64.81 3.47 100.56
L2_022_000M1_scaffold_9855 2 1256 bp 39.65 3.70 100.56
L2_022_000M1_scaffold_5343
Species: Ruminococcus sp. CAG:90 (100%)
2 1966 bp 44.05 3.97 100.56
L2_022_000M1_scaffold_12363
Species: Lachnospiraceae bacterium TWA4 (50%)
2 1071 bp 35.11 3.36 100.56
L2_022_000M1_scaffold_12510
Species: Bacteroides caccae (100%)
2 1062 bp 42.00 2.68 100.57
L2_022_000M1_scaffold_4857
Species: [Clostridium] saccharolyticum (66.67%)
3 2121 bp 49.32 5.09 100.57
L2_022_000M1_scaffold_7171
Species: Dorea formicigenerans CAG:28 (50%)
2 1578 bp 52.22 5.32 100.57
L2_022_000M1_scaffold_5516
Species: Faecalitalea cylindroides (100%)
2 1918 bp 49.48 6.57 100.57
L2_022_000M1_scaffold_12933
Species: Bacteroides ovatus (100%)
2 1038 bp 45.28 3.47 100.58
L2_022_000M1_scaffold_5643
Species: Lysinibacillus sinduriensis (50%)
2 1885 bp 51.78 4.62 100.58
L2_022_000M1_scaffold_9063
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1336 bp 43.71 3.82 100.60
L2_022_000M1_scaffold_4765
Order: Clostridiales (66.67%)
3 2162 bp 46.76 7.08 100.60
L2_022_000M1_scaffold_11072
Species: [Ruminococcus] gnavus (50%)
2 1154 bp 44.80 4.03 100.61
L2_022_000M1_scaffold_11303
Species: Modestobacter sp. KNN45-2b (50%)
2 1139 bp 58.82 3.56 100.62
L2_022_000M1_scaffold_15647
Species: Lachnospiraceae bacterium 3_1_46FAA (100%)
3 1789 bp 42.87 4.70 100.62
L2_022_000M1_scaffold_6835
Species: Lachnospiraceae bacterium 10-1 (50%)
4 1625 bp 42.77 5.72 100.62
L2_022_000M1_scaffold_7998
Species: Chlamydia trachomatis (50%)
2 1458 bp 29.42 2.88 100.62
L2_022_000M1_scaffold_9558
Species: Blautia sp. KLE 1732 (100%)
2 1285 bp 48.95 4.90 100.62
L2_022_000M1_scaffold_11530
Species: Dialister invisus (50%)
2 1124 bp 39.23 4.00 100.62
L2_022_000M1_scaffold_11600
Species: Ruminococcus sp. CAG:60 (100%)
2 1118 bp 46.15 5.10 100.63
L2_022_000M1_scaffold_7257
Species: Mahella australiensis (100%)
2 1565 bp 39.23 2.88 100.64
L2_022_000M1_scaffold_11955
Species: Roseburia inulinivorans (50%)
2 1094 bp 41.68 25.64 100.64
L2_022_000M1_scaffold_6382
Species: Ruminococcaceae bacterium D16 (50%)
2 1711 bp 68.21 4.82 100.64
Displaying items 13351-13400 of 13677 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.