ggKbase home page

L2_022_060G1_scaffold_518_7

Organism: L2_022_060G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 5053..5814

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Clostridium RepID=B6FM19_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 250.0
  • Bit_score: 470
  • Evalue 8.40e-130
Uncharacterized protein {ECO:0000313|EMBL:CDC22731.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 250.0
  • Bit_score: 470
  • Evalue 1.20e-129
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 242.0
  • Bit_score: 133
  • Evalue 6.90e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
ATGGGAGGAAGAATAGAATTTCGTGAAAAACTAAGCGGTATTTTGAAGATGGCAGAAGAGAATGGATGCCAGATTACAATAGACGAGGTAGAATGTTATTTTGAAGAGGAACATTTGTCAAAGGAACAGATAGAATTAGTCTTCGACTATCTTTTAGCGCAAAAGATAGTCGTAAAAGGCTATGAGAAGACTGGCGGAAGTGTGACGAGCAGTGAGGAAAACAAGACCGTATTTACTGAGGAAGAACAACGATATCTTAAAGAGTATATGAAAGATATTGGCGGAATGAGAGAGGCTGATGAAGAAGAACGAGAAGTGTTGTTTGAAAAAGCATTGGAAGGAGACGCACTGGCAAAAAGCAGGCTGGTGGAGATATATCTGCCGGAAGTTGTGGAAATTGCAAAAGAGCTGTATCACCCGGAAGTATTTTTGGGAGATCTCGTTCAGGAGGGAAATGTCGGACTGATTCTCGGTGTAGATATGATAGACGATTTGGACAAGGCACAGGACGTGATTCGCAGAGAGATCAGACAGGCTATTCAAATGTTGATCGAAGAACAGACGGAATTAAAAAACAGAGACAAGAAGATGGTAGAAAAGGTGAATACACTGGATGAAAGTATTCAAGCATTGACAGAGGAACTTGGGCGCAAGGTGACGCTCGAGGAGCTTGCAGTGTACATGGGAATGTCAGAAGAAGAGGTGGAAGATATTCTGCGGTTGACAGGAGAAGAGACACAAGAGGAGGAAGCGCAGCAATGA
PROTEIN sequence
Length: 254
MGGRIEFREKLSGILKMAEENGCQITIDEVECYFEEEHLSKEQIELVFDYLLAQKIVVKGYEKTGGSVTSSEENKTVFTEEEQRYLKEYMKDIGGMREADEEEREVLFEKALEGDALAKSRLVEIYLPEVVEIAKELYHPEVFLGDLVQEGNVGLILGVDMIDDLDKAQDVIRREIRQAIQMLIEEQTELKNRDKKMVEKVNTLDESIQALTEELGRKVTLEELAVYMGMSEEEVEDILRLTGEETQEEEAQQ*