ggKbase home page

L2_026_374G1_scaffold_175_25

Organism: L2_026_374G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 21964..22935

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 323.0
  • Bit_score: 637
  • Evalue 5.40e-180
Pseudouridine synthase, RluA family n=2 Tax=Clostridium RepID=B6FRV7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 323.0
  • Bit_score: 637
  • Evalue 3.90e-180
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 317.0
  • Bit_score: 387
  • Evalue 3.40e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 972
ATGCAGGAAATTATTGTAGCGGCAAATGAGGCCGGCCAGCGACTGGATAAGATGCTGGCGAAGTATTTAAACGAGGCACCAAAGAGCTTTTTATATAAAATGCTGCGAAAAAAAAATATTGTATTGAATGGGAAAAAGGCAACCGGAAACGAAAAGCTGGCGGTCGGTGATTCTGTAAAATTGTTTTTGGCTGATGAGACGATTGCAAAATTTTCCAATATCCATGCAGTTCATACCAATGTAACGCTTGATATTATCTATGAAGATGAGAATGTACTGCTGATCAACAAACCGGTTGGGATGCTGTCACAAAAGGCAGCGGCCGATGATGAATCGCTTGTGGAACATATTATTTCATATATGCTTGAAACAAGACAATTGACAGAGGAAGAACTTAGAAAATTCAGACCGTCTGTCTGCAACCGTTTGGACCGCAATACGAGTGGACTGGTGGCAGCAGGGAAAAGTCTTGCAGGGCTGCAGGAGATGGGAACACTTTTTAAAAATCGTTCTCTGAGAAAATATTATCGCTGTCTTGTGGCAGGTGAGGTAAAACATTCTCAGTCGGTGAGCGGATATCTTGTAAAAGACGAAAAGACAAATAAAGTAACGGTGTCAAAGGCAGAAAAAGGGGATTGCCTGCCGATTGAGACAGAATATGAGCCTTTGTGGAGCAATGGAAAATATACATATTTGGAAGTGCATCTGATCACCGGTAGAACGCATCAGATCAGGGCACATCTGGCATCGATTGGATATCCGATTATCGGAGACTACAAGTATGGGAGCAAAAAGGTCAACGATAGACTAAAAGAGCAGTATGGACTGAAAAGTCAGTTGTTACATGCTTATCGGCTGGAAATGCCAGCCTGTACAGGTGAGTTGTCGAATCTAAGTGAAAGAAAATTTGTGGCACCACTTCCAAAATTGTTTCAGAATATTTTAAAAGCAGAAAAATACAGTGAGGAATAG
PROTEIN sequence
Length: 324
MQEIIVAANEAGQRLDKMLAKYLNEAPKSFLYKMLRKKNIVLNGKKATGNEKLAVGDSVKLFLADETIAKFSNIHAVHTNVTLDIIYEDENVLLINKPVGMLSQKAAADDESLVEHIISYMLETRQLTEEELRKFRPSVCNRLDRNTSGLVAAGKSLAGLQEMGTLFKNRSLRKYYRCLVAGEVKHSQSVSGYLVKDEKTNKVTVSKAEKGDCLPIETEYEPLWSNGKYTYLEVHLITGRTHQIRAHLASIGYPIIGDYKYGSKKVNDRLKEQYGLKSQLLHAYRLEMPACTGELSNLSERKFVAPLPKLFQNILKAEKYSEE*