ggKbase home page

L2_037_000G1_scaffold_323_7

Organism: L2_037_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 18
Location: comp(5587..7587)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 666.0
  • Bit_score: 1317
  • Evalue 0.0
Topoisomerase IA (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 703.0
  • Bit_score: 1059
  • Evalue 0.0
DNA topoisomerase n=3 Tax=Clostridium RepID=R6PJU5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 666.0
  • Bit_score: 1317
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2001
ATGGGAAAATCAGTATACATAGCGGAGAAGCCAAGCGTGGCACAGGAATTCGCAAAAGCATTAAAATTGAATACGAGAAAAAAAGACGGATATCTGGAATCTGATGAGGCGATTGTCACATGGTGTGTTGGACATCTTGTGACAATGAGTTATCCGGAGGTGTATGATGAGAAATATAAAAGATGGAGTCTTGAGACGTTGCCGTTTATGCCAAAAGAGTTCAAATACGAGGTGATTCCGAACGTAAAAAAGCAGTTCCAAATTGTGAGTGGCGTGTTGAATCGACAGGATGTGGATACGATTTATGTGTGCACTGACTCCGGGCGTGAGGGGGAATATATTTACCGTCTGGTGGAACAGATGGCAGAGGTGAAAGGAAAGAAAAGAAAACGTGTGTGGATTGATTCCCAGACAGAAGAAGAGATTCTTCGTGGAATCCGTGAAGCGAAAGATCTGGAGGAATATGATAACTTATCCGCATCAGCGTATCTGCGGGCAAAAGAAGATTACCTGATGGGAATTAATTTCTCTAGACTTCTGACGCTGAAATACGGCAATAGTATCTCAAATTATCTTGGTCACAAATACACAGTCCTTTCTGTCGGGCGTGTTATGACATGCGTACTCGGTATGGTAGTGAGAAGAGAGCGGGAAATTCGGGAATTTGTAAAGACGCCGTTTTACAGAGTGCTCAGCAGCATTTCACTGGAAGAAAAGAATTTTGATGGTGAATGGAAGGCAGTGAAGGGTTCTAAATATTTTGAGTCATTGGATCTTTATAAGGAAAATGGCTTTAAAGAGAAGGTGAAGGCAGAAGAACTGATTGCCTATTTAAGCGATGGAGAACCGCTTACTTGCACAGTCACTGCAATTGAAAAAAAGAAAGAAAAAAAGAATCCGCCACTCCTTTATAATCTGGCAGAGCTTCAGAATGAATGTTCCAAACGATTTAAGATCAGTCCGGATGAGACACTTCGGATCGTCCAGGAACTGTATGAAAAGAAACTGGTGACGTATCCGAGAACGGATGCCAGAGTGCTTTCGACAGCAGTGGCAAAAGAGATTCACAAAAATCTGAACGGTCTGTCCAAATATGATATGGCATCTCCTTATCTGAAAGATATTGTTGCGTTTGGAAGTCATAAAGGCTTAGAAAAAACAAGGTATGTCAATGACAAGCAGATCACAGATCACTATGCAATCATACCGACCGGTCAGGGGCTGCAGGCATTGAATAGTGTATCACATACTGCAAGGCAGGTATACGACACGATTGTCAGAAGGTTTTTGAGTATTTTCTATCCTCCGGCTGTTTATCAGAAAGTCAGTATTACAACCAAGATCAAAGAGGAAAGCTTTTTCTCCAATTTCAAGGTTTTGGCAGAGGAAGGATATCTGAAAGTGGTCGGGACCGGAAATGCGGGTAAACAGGATTCGGAAAGTGACATGGACATGAACTTTTTTGAACTGCTTCAGACAGTGAAAAAAGGAACGGTGTTACCGGTAAAGGAATTGACAATCAAAGAAGGAGAGACTTCGCCACCGAAGAGATACAATTCGGGGTCGATTATTCTTGCGATGGAGAATGCGGGGCAGCTCATTGAAGATGAGGATTTGCGCGCCCAGATTAAAGGAAGTGGTATCGGAACGAGTGCAACCAGGGCAGAGATTCTGAAAAAGCTGATTCATATTAAATATTTGATGTTAAATAAAAAAACACAGATCATTACACCGACGCTGCTTGGAGAAATGGTTTTTGATGTAGTGGAACATTCAATCCGCTCACTTTTGAACCCGGAACTTACTGCAAGTTGGGAAAAAGGACTCACCTATGTGGCAGACGGCGAGATTACATCGGATGAGTATATGATGAAGCTGGAACATTTTATTAACAGTCGTACGCAAGGTGTTTTGCGGTTGAGTAATCAGTATCAGCTGAGAGGCTGTTACGATAAGGCGGCAATATTTTATAAAAAAGAAAAACAGACAAAGAAGGGGTAA
PROTEIN sequence
Length: 667
MGKSVYIAEKPSVAQEFAKALKLNTRKKDGYLESDEAIVTWCVGHLVTMSYPEVYDEKYKRWSLETLPFMPKEFKYEVIPNVKKQFQIVSGVLNRQDVDTIYVCTDSGREGEYIYRLVEQMAEVKGKKRKRVWIDSQTEEEILRGIREAKDLEEYDNLSASAYLRAKEDYLMGINFSRLLTLKYGNSISNYLGHKYTVLSVGRVMTCVLGMVVRREREIREFVKTPFYRVLSSISLEEKNFDGEWKAVKGSKYFESLDLYKENGFKEKVKAEELIAYLSDGEPLTCTVTAIEKKKEKKNPPLLYNLAELQNECSKRFKISPDETLRIVQELYEKKLVTYPRTDARVLSTAVAKEIHKNLNGLSKYDMASPYLKDIVAFGSHKGLEKTRYVNDKQITDHYAIIPTGQGLQALNSVSHTARQVYDTIVRRFLSIFYPPAVYQKVSITTKIKEESFFSNFKVLAEEGYLKVVGTGNAGKQDSESDMDMNFFELLQTVKKGTVLPVKELTIKEGETSPPKRYNSGSIILAMENAGQLIEDEDLRAQIKGSGIGTSATRAEILKKLIHIKYLMLNKKTQIITPTLLGEMVFDVVEHSIRSLLNPELTASWEKGLTYVADGEITSDEYMMKLEHFINSRTQGVLRLSNQYQLRGCYDKAAIFYKKEKQTKKG*