ggKbase home page

L2_038_000M1_scaffold_723_12

Organism: L2_038_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(9336..10073)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCP6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 245.0
  • Bit_score: 478
  • Evalue 3.90e-132
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 245.0
  • Bit_score: 478
  • Evalue 5.50e-132
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 242.0
  • Bit_score: 354
  • Evalue 1.40e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:91 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
ATGGTCTTAAAGATAGCAATACCGGGAAAAATGCAGTTTAAAATGATGCGCAGGGAGCCTTATCTGCTGCACCGGAAAGGAGATGTCCACTATATCGGTGGCGCGGAGGTACTGCCGCCGCCCCTGCCCAGTGAGCAGGAGAATCAGGTGATCGGTGATCTGGGGACGGAATACGAGGATGAGGCGAAAGCCATCCTGATCGAACATAACCTGCGTCTGGTGGTCTACATAGCCAAAAAATTCGATAACACCGGTGTAGGGGTGGAGGATCTGATCTCCATTGGCACCATCGGACTGATCAAGTCTATCAACACCTTCAATCCGGAGAAGAATATCAAGCTGGCAACCTATGCTTCCCGGTGCATTGAAAATGAGATACTGATGTATCTGCGCCGGAATAACAAGACGAAAATGGAAGTCTCGATTGACGAGCCGTTGAATGTAGACTGGGACGGCAACGAGCTGCTGTTGTCGGATATTCTGGGGACGGATGAGGATGTGATCTATCGCGGTATAGAGAATGAGGTGGAGCGGAAGCTTCTCATGAATGCTGTGAGCAAATTGTCCAAGCGGGAGAAAACCATTGTCAGACTCCGGTTCGGTCTGGGAACGGTAGATGGTCAGGAGATGACCCAGAAAGAAGTGGCAGGTCTTCTTGGTATCTCACAATCCTATATTTCAAGACTGGAGAAAAAGATCATGCGGCAGCTGAAAAAGGAGATCAGCCTGCATATTTGA
PROTEIN sequence
Length: 246
MVLKIAIPGKMQFKMMRREPYLLHRKGDVHYIGGAEVLPPPLPSEQENQVIGDLGTEYEDEAKAILIEHNLRLVVYIAKKFDNTGVGVEDLISIGTIGLIKSINTFNPEKNIKLATYASRCIENEILMYLRRNNKTKMEVSIDEPLNVDWDGNELLLSDILGTDEDVIYRGIENEVERKLLMNAVSKLSKREKTIVRLRFGLGTVDGQEMTQKEVAGLLGISQSYISRLEKKIMRQLKKEISLHI*