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L2_039_239G1_public_UNK

In projects: L2_039_239G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 47.59 Longest contig: 513.27 Kbp Bin length: 98.29 Mbp GC content: 49.26 %
Contigs count: 20920 Features count: 109566 rRNAs count: 20 tRNAs count: 1633

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Displaying items 20401-20450 of 20920 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_039_239G1_scaffold_9032
Species: Klebsiella pneumoniae (100%)
3 1864 bp 64.48 4.35 100.43
L2_039_239G1_scaffold_7761
Species: Flavonifractor plautii (100%)
2 2082 bp 52.40 5.04 100.43
L2_039_239G1_scaffold_17408
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 1150 bp 32.52 4.43 100.44
L2_039_239G1_scaffold_17470
Species: Eggerthella sp. HGA1 (50%)
2 1147 bp 69.05 7.32 100.44
L2_039_239G1_scaffold_17561
Species: Clostridium sp. CAG:169 (100%)
2 1141 bp 54.69 3.42 100.44
L2_039_239G1_scaffold_13890
Species: Blautia obeum (100%)
2 1362 bp 34.07 6.28 100.44
L2_039_239G1_scaffold_11306
Order: Clostridiales (66.67%)
3 1586 bp 49.12 5.11 100.44
L2_039_239G1_scaffold_17745
Species: Gordonibacter pamelaeae (50%)
2 1132 bp 68.64 4.77 100.44
L2_039_239G1_scaffold_9540
Order: Clostridiales (66.67%)
3 1795 bp 50.47 3.84 100.45
L2_039_239G1_scaffold_11466
Species: uncultured bacterium (50%)
2 1568 bp 50.83 13.97 100.45
L2_039_239G1_scaffold_14195
Species: Klebsiella sp. OBRC7 (50%)
2 1341 bp 41.61 5.03 100.45
L2_039_239G1_scaffold_11543
Species: human gut metagenome (50%)
2 1559 bp 38.55 5.10 100.45
L2_039_239G1_scaffold_11649
Species: Clostridium butyricum (50%)
2 1550 bp 27.55 4.26 100.45
L2_039_239G1_scaffold_14411
Species: Clostridium sp. CAG:169 (100%)
2 1326 bp 58.14 4.98 100.45
L2_039_239G1_scaffold_9778
Species: [Ruminococcus] gnavus (50%)
4 1762 bp 45.69 4.60 100.45
L2_039_239G1_scaffold_8644
Species: Dorea sp. CAG:317 (66.67%)
3 2858 bp 45.21 3.78 100.46
L2_039_239G1_scaffold_11879
Species: Eggerthella lenta (100%)
3 1526 bp 65.27 4.23 100.46
L2_039_239G1_scaffold_11910
Species: Erysipelatoclostridium ramosum (50%)
2 1523 bp 38.35 3.64 100.46
L2_039_239G1_scaffold_18870
Species: Holdemanella biformis (100%)
2 1078 bp 33.40 3.62 100.46
L2_039_239G1_scaffold_12062
Species: Eggerthella lenta (50%)
2 1508 bp 66.38 5.77 100.46
L2_039_239G1_scaffold_12063
Species: Blautia sp. CAG:257 (100%)
2 1508 bp 48.28 3.78 100.46
L2_039_239G1_scaffold_7428
Species: Eubacterium plexicaudatum (50%)
2 2153 bp 39.62 5.23 100.46
L2_039_239G1_scaffold_12102
Species: Cronobacter malonaticus (50%)
2 1505 bp 50.03 3.89 100.47
L2_039_239G1_scaffold_18954
Genus: Veillonella (100%)
3 1075 bp 48.47 4.74 100.47
L2_039_239G1_scaffold_15129
Species: Bifidobacterium longum (100%)
2 1281 bp 49.88 2.34 100.47
L2_039_239G1_scaffold_15277
Species: Klebsiella pneumoniae (50%)
2 1272 bp 61.40 4.72 100.47
L2_039_239G1_scaffold_12366
Species: [Eubacterium] dolichum (50%)
4 1481 bp 44.63 3.24 100.47
L2_039_239G1_scaffold_6706
Species: [Eubacterium] dolichum (66.67%)
3 2323 bp 42.45 4.33 100.47
L2_039_239G1_scaffold_12407
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 1478 bp 32.21 6.39 100.47
L2_039_239G1_scaffold_10365
Species: Clostridium sp. KLE 1755 (50%)
2 1687 bp 43.92 3.82 100.47
L2_039_239G1_scaffold_15459
Species: Ruminococcus gnavus CAG:126 (100%)
2 1260 bp 48.33 4.05 100.48
L2_039_239G1_scaffold_19760
Species: Clostridium nexile CAG:348 (50%)
2 1039 bp 45.62 5.20 100.48
L2_039_239G1_scaffold_19766
Species: Roseburia hominis (100%)
2 1039 bp 53.51 3.46 100.48
L2_039_239G1_scaffold_10598
Species: Ruminococcus gnavus CAG:126 (50%)
2 1660 bp 44.34 6.33 100.48
L2_039_239G1_scaffold_5563
Species: Klebsiella pneumoniae (75%)
4 2687 bp 61.33 5.19 100.48
L2_039_239G1_scaffold_9104
Species: Flavonifractor plautii (50%)
2 1854 bp 64.62 7.44 100.49
L2_039_239G1_scaffold_10787
Genus: Eggerthella (66.67%)
3 1639 bp 69.43 5.67 100.49
L2_039_239G1_scaffold_20149
Species: Pseudoflavonifractor capillosus (50%)
2 1024 bp 60.64 6.01 100.49
L2_039_239G1_scaffold_10864
Species: Coprococcus sp. HPP0048 (50%)
2 1630 bp 42.27 5.89 100.49
L2_039_239G1_scaffold_13188
Order: Clostridiales (66.67%)
3 1415 bp 42.54 3.60 100.50
L2_039_239G1_scaffold_16263
Species: Blautia hydrogenotrophica (100%)
2 1212 bp 48.68 6.31 100.50
L2_039_239G1_scaffold_20554
Species: Escherichia coli (50%)
2 1009 bp 61.35 3.87 100.50
L2_039_239G1_scaffold_16296
Species: Parvimonas sp. oral taxon 110 (50%)
2 1209 bp 34.74 2.98 100.50
L2_039_239G1_scaffold_2368
Order: Clostridiales (83.33%)
6 5985 bp 66.23 6.99 100.50
L2_039_239G1_scaffold_13514
Species: Coprococcus comes CAG:19 (66.67%)
3 1391 bp 46.01 5.39 100.50
L2_039_239G1_scaffold_13671
Species: Eggerthella sp. YY7918 (50%)
2 1379 bp 53.73 3.26 100.51
L2_039_239G1_scaffold_11536
Species: Holdemanella biformis (75%)
4 1561 bp 36.32 5.00 100.51
L2_039_239G1_scaffold_13939
Species: Hungatella hathewayi (50%)
2 1358 bp 45.29 2.87 100.52
L2_039_239G1_scaffold_17184
Species: Lachnospiraceae bacterium 3-2 (50%)
2 1161 bp 41.17 6.46 100.52
L2_039_239G1_scaffold_17248
Species: Anaerostipes sp. CAG:276 (100%)
2 1158 bp 49.65 3.89 100.52
Displaying items 20401-20450 of 20920 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.