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L2_059_052G1_scaffold_90

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_052G1_scaffold_90_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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384..1031
DNA (648bp) protein (216aa)
Uncharacterized GST-like protein yfcG n=42 Tax=Escherichia coli RepID=E2QPG3_ECOLX
glutathione S-transferase
Disulfide bond reductase {ECO:0000313|EMBL:EHU09100.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_059_052G1_scaffold_90_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1088..1450
DNA (363bp) protein (121aa)
D-erythro-7,8-dihydroneopterin triphosphate 2''''-epimerase n=1 Tax=Escherichia coli RepID=UPI0003818577
hypothetical protein
Dihydroneopterin aldolase {ECO:0000313|EMBL:EGI11960.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L2_059_052G1_scaffold_90_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1471..2364
DNA (894bp) protein (298aa)
UPF0105 protein yfch n=5 Tax=Escherichia coli RepID=E2QPG5_ECOLX
hypothetical protein
Epimerase yfcH {ECO:0000313|EMBL:EOW97238.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_059_052G1_scaffold_90_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..3302)
DNA (891bp) protein (297aa)
Uncharacterized protein yfcI n=108 Tax=Escherichia coli RepID=E2QPG6_ECOLX
yfcI; hypothetical protein
Transposase {ECO:0000313|EMBL:ELJ70596.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_059_052G1_scaffold_90_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3498..4271)
DNA (774bp) protein (258aa)
ATP-binding component of histidine transport n=1065 Tax=Enterobacteriaceae RepID=C3T232_ECOLX
hisP; histidine/lysine/arginine/ornithine transporter subunit
HisP {ECO:0000313|EMBL:EHU44357.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L2_059_052G1_scaffold_90_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4279..4995)
DNA (717bp) protein (239aa)
Histidine transport system permease protein HisM n=1281 Tax=Enterobacteriaceae RepID=HISM_ECO57
histidine transport system permease HisM
Histidine transport system permease protein hisM {ECO:0000313|EMBL:EZK21779.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L2_059_052G1_scaffold_90_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4992..5678)
DNA (687bp) protein (229aa)
Histidine ABC transporter, permease protein HisQ n=59 Tax=Escherichia coli RepID=B3HLZ8_ECOLX
Histidine transport system permease hisQ {ECO:0000313|EMBL:EQP50627.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
polar amino acid ABC transporter inner membrane subunit
L2_059_052G1_scaffold_90_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5768..6550)
DNA (783bp) protein (261aa)
Histidine-binding periplasmic protein n=1141 Tax=Enterobacteriaceae RepID=HISJ_ECO57
cationic amino acid ABC transporter periplasmic binding protein
Histidine ABC transporter, periplasmic histidine-binding protein HisJ {ECO:0000313|EMBL:EGI50134.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L2_059_052G1_scaffold_90_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6771..7553)
DNA (783bp) protein (261aa)
Lysine-arginine-ornithine-binding periplasmic protein n=92 Tax=Escherichia coli RepID=E2QPH1_ECOLX
argT; lysine/arginine/ornithine transporter subunit
Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:EOU71887.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L2_059_052G1_scaffold_90_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7819..8388)
DNA (570bp) protein (190aa)
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=121 Tax=Escherichia coli RepID=E1PIU6_ECOAB
L2_059_052G1_scaffold_90_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8483..10000)
DNA (1518bp) protein (506aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
Amidophosphoribosyltransferase n=717 Tax=Enterobacteriaceae RepID=C3T202_ECOLX
L2_059_052G1_scaffold_90_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10037..10525)
DNA (489bp) protein (163aa)
Colicin V production protein n=1 Tax=Escherichia coli HVH 9 (4-6942539) RepID=T5PNU6_ECOLX
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:KDW81848.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L2_059_052G1_scaffold_90_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11057..11719)
DNA (663bp) protein (221aa)
Cell division protein DedD {ECO:0000313|EMBL:EHU54966.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EHU54966.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Protein dedD n=215 Tax=Escherichia coli RepID=E2QPH5_ECOLX
hypothetical protein
L2_059_052G1_scaffold_90_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11709..12977)
DNA (1269bp) protein (423aa)
Bifunctional protein FolC n=141 Tax=Escherichia coli RepID=E2QPH6_ECOLX
folC; bifunctional folylpolyglutamate synthase
Bifunctional protein FolC {ECO:0000256|PIRNR:PIRNR001563}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_059_052G1_scaffold_90_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13047..13961)
DNA (915bp) protein (305aa)
accD; acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1236 Tax=Bacteria RepID=ACCD_ECO24
L2_059_052G1_scaffold_90_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14117..14776)
DNA (660bp) protein (220aa)
Protein dedA n=11 Tax=Escherichia coli RepID=L2XGY5_ECOLX
Protein dedA {ECO:0000313|EMBL:EQN95612.1}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
hypothetical protein
L2_059_052G1_scaffold_90_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14859..15671)
DNA (813bp) protein (271aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
tRNA pseudouridine synthase A n=265 Tax=Escherichia RepID=TRUA_ECO24
L2_059_052G1_scaffold_90_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15671..16684)
DNA (1014bp) protein (338aa)
USG-1 protein n=25 Tax=Escherichia coli RepID=L3B691_ECOLX
usg; USG-1 protein
Putative semialdehyde dehydrogenase {ECO:0000313|EMBL:CKI29766.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_059_052G1_scaffold_90_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16750..17886)
DNA (1137bp) protein (379aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01825}; EC=1.1.1.290 {ECO:0000255|HAMAP-Rule:MF_01825};; TaxID=405955 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O1:K1 / APEC.;"
Erythronate-4-phosphate dehydrogenase n=145 Tax=Escherichia RepID=PDXB_ECO45
pdxB; erythronate-4-phosphate dehydrogenase
L2_059_052G1_scaffold_90_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17985..18980
DNA (996bp) protein (332aa)
Flagellar regulator flk n=3 Tax=Escherichia coli RepID=E2QPI2_ECOLX
flk; flagella biosynthesis regulator
Flagellar regulator flk {ECO:0000256|PIRNR:PIRNR020588}; Fluke {ECO:0000256|PIRNR:PIRNR020588}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_059_052G1_scaffold_90_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18977..20155)
DNA (1179bp) protein (393aa)
UPF0226 membrane protein yfcJ n=223 Tax=Escherichia RepID=E2QPI3_ECOLX
major facilitator family transporter
UPF0226 membrane protein HMPREF9530_01885 {ECO:0000256|HAMAP-Rule:MF_01118}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_059_052G1_scaffold_90_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20420..21640)
DNA (1221bp) protein (407aa)
Beta-ketoacyl-acyl-carrier-protein synthase I {ECO:0000313|EMBL:EFJ75057.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EFJ75057.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
3-oxoacyl-[acyl-carrier-protein] synthase 1 n=1015 Tax=Enterobacteriaceae RepID=FABB_ECOL6
fabB; 3-oxoacyl-ACP synthase
L2_059_052G1_scaffold_90_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21799..23805
DNA (2007bp) protein (669aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=3 Tax=Escherichia coli RepID=E2QPI5_ECOLX
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_059_052G1_scaffold_90_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23925..24203)
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=T5P8W1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AIX64196.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
yfcL; hypothetical protein
L2_059_052G1_scaffold_90_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24237..24785)
DNA (549bp) protein (183aa)
Uncharacterized protein n=406 Tax=Enterobacteriaceae RepID=B7LBI0_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU21962.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_059_052G1_scaffold_90_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24785..25594)
DNA (810bp) protein (270aa)
UPF0721 transmembrane protein YfcA n=915 Tax=Bacteria RepID=YFCA_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU35233.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L2_059_052G1_scaffold_90_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25594..26418)
DNA (825bp) protein (275aa)
Penicillin-insensitive murein endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067071}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067077};; D-alanyl-D-alanine-endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623}; Flags: Precursor;; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
Penicillin-insensitive murein endopeptidase n=1 Tax=Escherichia coli HVH 9 (4-6942539) RepID=T5PNW3_ECOLX
mepA; murein DD-endopeptidase
L2_059_052G1_scaffold_90_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26422..27507)
DNA (1086bp) protein (362aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Chorismate synthase n=88 Tax=Escherichia RepID=AROC_ECO45
L2_059_052G1_scaffold_90_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27542..28474)
DNA (933bp) protein (311aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
50S ribosomal protein L3 glutamine methyltransferase n=164 Tax=Enterobacteriaceae RepID=B7LLE0_ESCF3
prmB; ribosomal large subunit L3 protein glutamine methyltransferase
L2_059_052G1_scaffold_90_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28640..29191
DNA (552bp) protein (184aa)
UPF0115 protein YfcN n=794 Tax=Enterobacteriaceae RepID=YFCN_ECO24
hypothetical protein
UPF0115 protein YfcN {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
Displaying items 1-30 of 78 in total

View Taxonomy