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L3_058_000M1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_247_1
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

148..3579
DNA (3432bp) protein (1144aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YJP9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB54157.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_058_000M1_scaffold_247_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4408..5400
DNA (993bp) protein (331aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4R0_9PORP
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDD13382.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
oxidoreductase
L3_058_000M1_scaffold_247_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5441..8371
DNA (2931bp) protein (977aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13383.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_058_000M1_scaffold_247_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8377..9048)
DNA (672bp) protein (224aa)
TIGR02453 family protein n=3 Tax=Parabacteroides RepID=A7AFT6_9PORP
TIGR02453 family protein {ECO:0000313|EMBL:CDD13384.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_058_000M1_scaffold_247_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9066..9935)
DNA (870bp) protein (290aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVN9_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD13385.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AraC family transcriptional regulator
L3_058_000M1_scaffold_247_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10058..11236
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A1P2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17465.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
major facilitator superfamily MFS_1
L3_058_000M1_scaffold_247_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11306..12712)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15665.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_058_000M1_scaffold_247_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12738..14243)
DNA (1506bp) protein (502aa)
Putative ferredoxin-type protein NapF n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6Y6_9PORP
Putative ferredoxin-type protein NapF {ECO:0000313|EMBL:CDD14889.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ferredoxin-type protein
L3_058_000M1_scaffold_247_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14352..15212)
DNA (861bp) protein (287aa)
Putative esterase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WU68_9PORP
Putative esterase {ECO:0000313|EMBL:CDD14888.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
esterase
L3_058_000M1_scaffold_247_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15322..16260)
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
2-dehydropantoate 2-reductase n=3 Tax=Parabacteroides merdae RepID=A7AFU7_9PORP
2-dehydropantoate 2-reductase
L3_058_000M1_scaffold_247_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16309..17169)
DNA (861bp) protein (287aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BDE9_9PORP
pyridoxal kinase
L3_058_000M1_scaffold_247_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17244..18308
DNA (1065bp) protein (355aa)
Methionine-R-sulfoxide reductase n=2 Tax=Parabacteroides merdae RepID=A7AFU9_9PORP
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EDN86005.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
bifunctional methionine sulfoxide reductase A/B
L3_058_000M1_scaffold_247_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18356..19537)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFV0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86006.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Predicted membrane protein
L3_058_000M1_scaffold_247_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20046..20519
DNA (474bp) protein (158aa)
Thioredoxin n=2 Tax=Parabacteroides merdae RepID=K6B1J8_9PORP
Thioredoxin {ECO:0000313|EMBL:EKN15672.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
thioredoxin
L3_058_000M1_scaffold_247_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(20685..21233)
DNA (549bp) protein (183aa)
30S ribosomal protein S16 n=2 Tax=Parabacteroides merdae RepID=A7AFV5_9PORP
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rpsP; 30S ribosomal protein S16
L3_058_000M1_scaffold_247_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21383..22324
DNA (942bp) protein (314aa)
Glycosyl hydrolase, family 43 n=2 Tax=Parabacteroides merdae RepID=A7AFV6_9PORP
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDN86012.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
1,4-beta-xylanase
L3_058_000M1_scaffold_247_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22496..24133
DNA (1638bp) protein (546aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AFW0_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN86016.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_058_000M1_scaffold_247_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24130..25608)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11365.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_058_000M1_scaffold_247_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25765..26376
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFW2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86018.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transmembrane protein
L3_058_000M1_scaffold_247_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26395..27465
DNA (1071bp) protein (357aa)
L-asparaginase type I n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYQ7_9PORP
L-asparaginase type I {ECO:0000313|EMBL:CDD11362.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L-asparaginase I
L3_058_000M1_scaffold_247_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27496..28299
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=3 Tax=Parabacteroides RepID=A7AFW4_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD11361.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
metallo-beta-lactamase superfamily hydrolase
L3_058_000M1_scaffold_247_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28581..28904)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFW5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86022.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_058_000M1_scaffold_247_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29316..30521
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C0U6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86023.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_247_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30542..30928
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A4G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15682.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_058_000M1_scaffold_247_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31033..32268
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BDG7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86024.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_247_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32265..32396
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11356.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_058_000M1_scaffold_247_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32492..33166
DNA (675bp) protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Signal peptidase I n=2 Tax=Parabacteroides merdae RepID=A7AFX0_9PORP
lepB_5; signal peptidase I
L3_058_000M1_scaffold_247_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33707..34138)
DNA (432bp) protein (144aa)
Ribose-5-phosphate isomerase B n=2 Tax=Parabacteroides merdae RepID=A7AFX1_9PORP
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDN86027.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ribose 5-phosphate isomerase B
L3_058_000M1_scaffold_247_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34241..36268)
DNA (2028bp) protein (676aa)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJN9_9PORP
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDD11353.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transketolase
L3_058_000M1_scaffold_247_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36604..37296)
DNA (693bp) protein (231aa)
Hydrolase, NUDIX family n=4 Tax=Parabacteroides RepID=A7AFX3_9PORP
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN86029.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
Displaying items 1-30 of 93 in total

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