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L3_058_072G1_scaffold_307_2

Organism: L3_058_072G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(1347..2087)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridium RepID=U2BUW6_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 476
  • Evalue 1.50e-131
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 476
  • Evalue 2.10e-131
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 246.0
  • Bit_score: 430
  • Evalue 2.00e-118

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Taxonomy

Clostridium sp. 7_3_54FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGGTTATAAAGTTAGCAGTACCGAATCAATTCCGTCTCAAGATGGTTCCGACATTTAAATCTGTTTTTCTTCAGAAAGAGGGCGAAGTCCATTATATCGGCGGTGCAGATATTCTTCCGGCTCCATTAGGCAGCAAGGAGGAGGCCGAGGTCCTGAAGGAACTGGGAACGGAAAGGGATGCCCAGGCAAAATCGAAGTTGATTGAACATAACCTCAGGCTTGTAGTCTACATAGCCAAGAAATTTGACAATACCAGCGTCGGCGTGGAGGATCTGATTTCCATTGGTTCCATCGGTCTTATCAAGGCAATCAATACCTTTAATATTGACAAGAACATCAAACTTGCCACCTATGCGTCACGATGCATCGAAAATGAAATTCTGATGTATTTGAGGCGGAACAATAAGACAAAGATGGAGGTATCCATCGATGAGCCGCTGAACGTGGACTGGGATGGCAATGAACTGCTGCTTTCCGATATTCTGGGCACGGATGAAGATGTTATATACCGGGATTTGGAAGATGAGATAGAGAAAAGTCTTTTAAACACGGCTATAAGCAGGCTGAATCCGAGAGAACAGAAAATTGTGGAGCTGCGCTTCGGTCTGGGAACGGAGAATGAGGATGAGATGACACAGAAGGAGGTAGCCGACCTCCTCGGTATCTCCCAGTCCTACATCTCCAGGCTTGAAAAGAAAATTATGAAGCGGTTGAAAAAAGAAATCGTGAAATACGAGTAG
PROTEIN sequence
Length: 247
MVIKLAVPNQFRLKMVPTFKSVFLQKEGEVHYIGGADILPAPLGSKEEAEVLKELGTERDAQAKSKLIEHNLRLVVYIAKKFDNTSVGVEDLISIGSIGLIKAINTFNIDKNIKLATYASRCIENEILMYLRRNNKTKMEVSIDEPLNVDWDGNELLLSDILGTDEDVIYRDLEDEIEKSLLNTAISRLNPREQKIVELRFGLGTENEDEMTQKEVADLLGISQSYISRLEKKIMKRLKKEIVKYE*