ggKbase home page

L3_063_368G1_scaffold_289_19

Organism: L3_063_368G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: comp(17098..18024)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 280.0
  • Bit_score: 315
  • Evalue 5.90e-83
Shikimate dehydrogenase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXH0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 280.0
  • Bit_score: 315
  • Evalue 4.20e-83
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 254.0
  • Bit_score: 191
  • Evalue 3.40e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoflavonifractor capillosus → Pseudoflavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 927
GTGTCCCGCCGCCCGGAGAGGGGCGGGAGACCGGCGTGGGAAAGTGAGGCTGACATCATGATGGAAAAAACGGAGCAGGGCCTGGGCAGGCTGTGCGTCATCGGTGACCCGGTGGAGCACTCCAAATCGCCCCTGATCCAGAACGCGATGATCGCGAAGCTGGGAATCCCTTATCACTACACCAAGCGCCTGGTCCACCAGGGGGATACCCAGGAGTGGCTGGATACCGCCCGCCGGGAGGGCTTCGCGGGCTTCAACGCCACCATGCCCCACAAGGTGGCCCTGGTCCCACTGATGGATGAGCTGGGGGAGGATGCCCGGCTGTACGGCGCGGTCAACACCGTGTGCATCCGGGGAAAGCGGTGCATCGGCCACAACACCGACGGGATGGGTTTCTACCAGGCTCTCACCGACCTGGGGGTGGAGGTGCCGGGCCGCCGCATCACCCTGCTGGGCGCGGGGGGCGCGGCCAAGGCTGTGGCCCTGAAGCTGGTGCAGCAGGGGGCGGGCCCCATCACCGTGTGCAACCGGACCCCCCAGAAGGCGGAGGCCCTGTGCAATCTGGCAAAGGGCCGGATGGGGCACATCGGTTTCGCCCTTGAGGACCTGCGCCGGGGCGCCAGGGACTGCGACATCCTCATCAACTGCACCAGTCTGGGCATGACAGGGACGAACAGCCAGTTCCGGGACCTGAGCTTCCTGGACGAACTGCCCGGGCACGCGGCGGTGTTCGACCTCATTTACAGCCCGGCCGAGACCGAGTTGCTGCGGCAGGCCCGGCTGCGGGGGCTGAAAGCGGCCAACGGCCTGGGGATGCTGATCTATCAGGCGGTCTTCGCCCTGGAGTATTTCGCCGACGTAAGGATCGACGCCAAGGAGATGGAACAGCACGTGATCGAGGCCTGCGGCCTGGGCGGAGAGGCATAA
PROTEIN sequence
Length: 309
VSRRPERGGRPAWESEADIMMEKTEQGLGRLCVIGDPVEHSKSPLIQNAMIAKLGIPYHYTKRLVHQGDTQEWLDTARREGFAGFNATMPHKVALVPLMDELGEDARLYGAVNTVCIRGKRCIGHNTDGMGFYQALTDLGVEVPGRRITLLGAGGAAKAVALKLVQQGAGPITVCNRTPQKAEALCNLAKGRMGHIGFALEDLRRGARDCDILINCTSLGMTGTNSQFRDLSFLDELPGHAAVFDLIYSPAETELLRQARLRGLKAANGLGMLIYQAVFALEYFADVRIDAKEMEQHVIEACGLGGEA*