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L3_068_368G1_scaffold_467_20

Organism: L3_068_368G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 15
Location: comp(20244..20783)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=2 Tax=Clostridium RepID=B6FUN3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 359
  • Evalue 1.90e-96
Uncharacterized protein {ECO:0000313|EMBL:CDC23482.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 359
  • Evalue 2.70e-96
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 166.0
  • Bit_score: 99
  • Evalue 1.00e-18

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Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGAAAAAACTGGTATTGGATGAAAAAACATTGGAAAACCTTATGAAACAATATACCGGATATGTTTATACGATTGTAAAAGGGATTTCCTGTGACTGTTTAGAAAAGGAAGATATGGAAGAAATTGTTTCTGACGTATTTTTTTCCTTATGGAAATCACAGCAGTCATTTGAAAATCACAATACTTTGAAACCATATTTAGCACAGATTGCCAGAAATCAAACACGAAACCGCTTACGAGAAAAACATAAACAGATTGTTCTTGAAGAAGAGAGTGTATTGGATTTTATCTGTGTGGATGAATATTTCGGTGAAAAAGAACAAATCGAAAAAATTCGGGAACTGCTAAATGAGCTTAATGCCGTTGAACAACATCTGATGTTGGCATATTATTTTTACGGATTTAAACTGAATGAAATCGCCAATACAATGCAGTTACCCATATCTACTGTGAAATCCAAATTATACCGAGGGCGCGATAAACTAATCACAAAATTCAAAGAAGGAGGAGTGACTCATGAAAAAAGTAAATCTGTATGA
PROTEIN sequence
Length: 180
MKKLVLDEKTLENLMKQYTGYVYTIVKGISCDCLEKEDMEEIVSDVFFSLWKSQQSFENHNTLKPYLAQIARNQTRNRLREKHKQIVLEEESVLDFICVDEYFGEKEQIEKIRELLNELNAVEQHLMLAYYFYGFKLNEIANTMQLPISTVKSKLYRGRDKLITKFKEGGVTHEKSKSV*