ggKbase home page

L3_069_000G1_scaffold_21

Search features with annotation key words

Displaying items 31-60 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_21_31
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32038..32601
DNA (564bp) protein (188aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQG4_9CLOT
Peroxiredoxin {ECO:0000313|EMBL:CDD38223.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_32
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32625..33929
DNA (1305bp) protein (435aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Clostridium sp. CAG:149 RepID=R5MFN6_9CLOT
L3_069_000G1_scaffold_21_33
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34020..35036
DNA (1017bp) protein (339aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z781_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDD39394.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_34
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35317..36825
DNA (1509bp) protein (503aa)
Predicted DNA-binding protein with the Helix-hairpin-helix motif n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZK7_9CLOT
Predicted DNA-binding protein with the Helix-hairpin-helix motif {ECO:0000313|EMBL:CDD39395.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted DNA-binding protein with the Helix-hairpin-helix motif
L3_069_000G1_scaffold_21_35
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36845..37609
DNA (765bp) protein (255aa)
Putative DNA metabolism protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEL4_9CLOT
Putative DNA metabolism protein {ECO:0000313|EMBL:CDD39396.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_36
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37740..38144
DNA (405bp) protein (135aa)
Transcriptional regulator GntR family n=1 Tax=Clostridium sp. CAG:299 RepID=R7A9H3_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDD39397.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, GntR family
L3_069_000G1_scaffold_21_37
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38137..39036
DNA (900bp) protein (300aa)
ABC-type multidrug transport system n=1 Tax=Clostridium sp. CAG:299 RepID=R6YTT8_9CLOT
ABC-type multidrug transport system {ECO:0000313|EMBL:CDD39398.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type multidrug transport system, ATPase component
L3_069_000G1_scaffold_21_38
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39011..41287
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z787_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39399.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_39
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41357..41863
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39400.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_40
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41871..42377
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39401.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted membrane protein
L3_069_000G1_scaffold_21_41
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42442..42747
DNA (306bp) protein (102aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:299 RepID=R7A9H8_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD39402.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_42
unknown

Not on your lists

comp(42836..42946)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_069_000G1_scaffold_21_43
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44446..44709
DNA (264bp) protein (88aa)
Mor transcription activator family protein n=5 Tax=Clostridium difficile RepID=T3EBK2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDS05102.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_069_000G1_scaffold_21_44
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44856..45563
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YTU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39403.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_45
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45577..46197
DNA (621bp) protein (207aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z794_9CLOT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDD39404.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_46
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46574..47677
DNA (1104bp) protein (368aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZL6_9CLOT
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDD39405.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Glycosyltransferases involved in cell wall biogenesis
L3_069_000G1_scaffold_21_47
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47864..49783
DNA (1920bp) protein (640aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase IV subunit B n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEM5_9CLOT
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:CDD39406.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_48
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


49852..52095
DNA (2244bp) protein (748aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
DNA topoisomerase (EC:5.99.1.3)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6YTU8_9CLOT
L3_069_000G1_scaffold_21_49
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52233..53525
DNA (1293bp) protein (431aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:149 RepID=R5LXP8_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CCY83978.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
amidohydrolase
L3_069_000G1_scaffold_21_50
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53601..54320
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEN4_9CLOT
L3_069_000G1_scaffold_21_51
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54348..55889
DNA (1542bp) protein (514aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A9J5_9CLOT
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD39417.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_52
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55893..56972
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39419.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type uncharacterized transport system, permease component
L3_069_000G1_scaffold_21_53
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56985..57899
DNA (915bp) protein (305aa)
Uncharacterized ABC-type transport system permease component n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZN2_9CLOT
Uncharacterized ABC-type transport system permease component {ECO:0000313|EMBL:CDD39420.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized ABC-type transport system, permease component
L3_069_000G1_scaffold_21_54
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57983..59119
DNA (1137bp) protein (379aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKA8_CLOSC
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CBK78132.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_069_000G1_scaffold_21_55
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59269..61041
DNA (1773bp) protein (591aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=2 Tax=Clostridium RepID=D4CEE4_9CLOT
L3_069_000G1_scaffold_21_56
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61155..62252
DNA (1098bp) protein (366aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZQ9_9CLOT
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDD39440.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_000G1_scaffold_21_57
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62279..63337
DNA (1059bp) protein (353aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEQ7_9CLOT
L3_069_000G1_scaffold_21_58
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63325..64326
DNA (1002bp) protein (334aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A9M0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD39442.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_59
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64341..66446
DNA (2106bp) protein (702aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YTX9_9CLOT
L3_069_000G1_scaffold_21_60
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66446..67126
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39444.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
Displaying items 31-60 of 223 in total

View Taxonomy