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L3_069_242G1_public_UNK

In projects: L3_069_242G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 59.42 Longest contig: 324.93 Kbp Bin length: 119.54 Mbp GC content: 50.41 %
Contigs count: 23185 Features count: 128146 rRNAs count: 24 tRNAs count: 1816

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Displaying items 351-400 of 23185 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_069_242G1_scaffold_7155
Species: Enterobacter cloacae (75%)
4 3277 bp 55.26 114.89 100.70
L3_069_242G1_scaffold_20223
Species: Bifidobacterium scardovii (100%)
2 1144 bp 70.02 3.41 100.70
L3_069_242G1_scaffold_8561
Species: Lachnospiraceae bacterium 10-1 (50%)
2 2720 bp 59.71 6.18 100.70
L3_069_242G1_scaffold_20149
Species: Enterobacter sp. MGH 14 (50%)
2 1147 bp 62.95 11.25 100.70
L3_069_242G1_scaffold_5296
Species: Bilophila wadsworthia (75%)
4 4448 bp 62.30 3.74 100.70
L3_069_242G1_scaffold_14485
Species: Lachnospiraceae bacterium 7_1_58FAA (100%)
2 1579 bp 54.27 5.51 100.70
L3_069_242G1_scaffold_22963
Species: Escherichia coli (50%)
2 1013 bp 56.66 155.33 100.69
L3_069_242G1_scaffold_22977
Species: Escherichia coli (50%)
2 1013 bp 57.65 103.80 100.69
L3_069_242G1_scaffold_22914
Species: Coprobacillus sp. CAG:183 (100%)
2 1016 bp 32.78 2.95 100.69
L3_069_242G1_scaffold_12183
Species: [Clostridium] bolteae (50%)
2 1889 bp 53.41 3.73 100.69
L3_069_242G1_scaffold_19586
Species: Escherichia coli (100%)
2 1180 bp 55.51 3.56 100.68
L3_069_242G1_scaffold_19534
Species: Ruminococcus gnavus CAG:126 (50%)
2 1183 bp 47.68 5.33 100.68
L3_069_242G1_scaffold_5891
Genus: Klebsiella (55.56%)
9 3999 bp 55.09 11.18 100.68
L3_069_242G1_scaffold_19471
Species: Coprobacillus sp. 29_1 (100%)
2 1186 bp 27.57 3.67 100.68
L3_069_242G1_scaffold_17132
Order: Enterobacteriales (100%)
4 1338 bp 56.95 7.40 100.67
L3_069_242G1_scaffold_22265
Species: Enterococcus faecium (50%)
2 1043 bp 41.80 8.49 100.67
L3_069_242G1_scaffold_18289
Species: Enterobacter cloacae (100%)
2 1946 bp 51.49 70.07 100.67
L3_069_242G1_scaffold_22147
Species: Veillonella sp. HPA0037 (50%)
2 1049 bp 38.42 5.15 100.67
L3_069_242G1_scaffold_19135
Species: Enterobacter sp. 35683 (50%)
2 1204 bp 63.54 42.36 100.66
L3_069_242G1_scaffold_5521
Species: Veillonella sp. ICM51a (50%)
6 4259 bp 40.08 6.41 100.66
L3_069_242G1_scaffold_18842
Species: Streptococcus thermophilus (100%)
3 1222 bp 29.54 3.44 100.66
L3_069_242G1_scaffold_21696
Species: Escherichia coli (100%)
2 1070 bp 55.79 4.21 100.65
L3_069_242G1_scaffold_21581
Species: Clostridium sp. ATCC BAA-442 (66.67%)
3 1076 bp 55.20 2.79 100.65
L3_069_242G1_scaffold_14816
Order: Enterobacteriales (50%)
4 1541 bp 64.05 320.34 100.65
L3_069_242G1_scaffold_18533
Species: Coprobacillus sp. 29_1 (100%)
3 1240 bp 29.52 4.60 100.65
L3_069_242G1_scaffold_18487
Species: Lachnospiraceae bacterium 7_1_58FAA (50%)
2 1243 bp 52.45 2.41 100.64
L3_069_242G1_scaffold_21302
Species: [Clostridium] clostridioforme (50%)
2 1088 bp 52.57 4.55 100.64
L3_069_242G1_scaffold_34394
Species: Escherichia albertii (50%)
2 1088 bp 51.19 31.16 100.64
L3_069_242G1_scaffold_21191
Species: Lachnospiraceae bacterium 2_1_58FAA (100%)
2 1094 bp 46.07 5.90 100.64
L3_069_242G1_scaffold_12217
Species: Bilophila sp. 4_1_30 (100%)
2 1881 bp 66.93 3.99 100.64
L3_069_242G1_scaffold_16007
Species: [Ruminococcus] gnavus (100%)
3 1428 bp 46.36 2.73 100.63
L3_069_242G1_scaffold_16011
Species: Enterobacter sp. MGH 24 (50%)
2 1428 bp 60.22 76.68 100.63
L3_069_242G1_scaffold_20820
Species: Veillonella atypica (50%)
2 1112 bp 40.47 6.07 100.63
L3_069_242G1_scaffold_11085
Species: Lachnospiraceae bacterium 3-2 (100%)
2 2087 bp 38.38 3.81 100.62
L3_069_242G1_scaffold_7674
Species: Oscillibacter sp. KLE 1745 (100%)
4 3053 bp 56.04 11.15 100.62
L3_069_242G1_scaffold_12969
Species: Oscillibacter sp. KLE 1745 (66.67%)
3 1771 bp 54.88 8.98 100.62
L3_069_242G1_scaffold_10257
Genus: Enterobacter (80%)
5 2260 bp 58.89 39.29 100.62
L3_069_242G1_scaffold_20252 3 1142 bp 55.17 3.68 100.61
L3_069_242G1_scaffold_7943
Species: Veillonella sp. DORA_A_3_16_22 (66.67%)
3 2940 bp 40.82 9.39 100.61
L3_069_242G1_scaffold_10137
Genus: Bifidobacterium (66.67%)
3 2287 bp 46.35 5.57 100.61
L3_069_242G1_scaffold_12769
Species: Enterobacter cloacae (80%)
5 1798 bp 59.90 82.76 100.61
L3_069_242G1_scaffold_12775
Species: Enterobacter cloacae (60%)
5 1798 bp 59.34 49.39 100.61
L3_069_242G1_scaffold_20208
Species: Firmicutes bacterium CAG:24 (100%)
2 1145 bp 56.51 3.14 100.61
L3_069_242G1_scaffold_10847
Species: Peptoclostridium difficile (50%)
2 2132 bp 40.62 6.05 100.61
L3_069_242G1_scaffold_19991
Species: [Eubacterium] hallii (100%)
2 1157 bp 40.10 3.63 100.61
L3_069_242G1_scaffold_12629
Species: Kosakonia sacchari (50%)
2 1819 bp 55.69 6.93 100.61
L3_069_242G1_scaffold_11592
Species: Veillonella sp. ICM51a (50%)
4 1986 bp 35.35 5.51 100.60
L3_069_242G1_scaffold_17128
Species: [Clostridium] symbiosum (50%)
2 1339 bp 39.51 5.83 100.60
L3_069_242G1_scaffold_12329
Species: Eubacterium hallii CAG:12 (50%)
2 1864 bp 37.50 3.06 100.59
L3_069_242G1_scaffold_16722
Species: Collinsella intestinalis (100%)
2 1372 bp 62.68 4.15 100.58
Displaying items 351-400 of 23185 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.