ggKbase home page

L3_072_000G1_scaffold_508_29

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 36038..36916

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=41 Tax=Lactobacillus casei group RepID=C5F5Q7_LACPA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 576
  • Evalue 1.30e-161
S1 RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 576
  • Evalue 3.50e-162
RNA-binding protein, S1-like domain {ECO:0000313|EMBL:EPC86297.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 576
  • Evalue 1.80e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus paracasei → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 879
ATGAATTTTAATGGCAGTATTGTCACCGCACAAGTGACGGATCACAATGACACGGAAGTCTTTGCTCAGCATGATGGCGTCACTTTGGCCATTGATCGCAGTGAGTTGGCTGAACTTCCAGAAGTTGGCAGTGATGTTGAGGGTTTTGCCTATGAAAATAAGCAAGGGCAGGCTCGTTTAACCACAAAAGTTCCGACAGTTGGCCGCGACCATTACGCTTTTGCAAAAGTAGTCGAAGTGCGTAAGGATCTTGGGGTATTTGTGAACATTGGCTTACCAGACAAAGATATTGTGGTCAGTGAAGACCAGTTACCTGAAATCAGCCGTTTATGGCCGCAAAAAGGCGATCAATTAATGGTTGCCTTAACAGTCGACAAAAAAGACCGGATGTGGGGCAATCTGGCTGATGAAAGTATCATCCACGCGGTTGCAAATCGCGCGAAGCCTGAACAGATGAATGCTGATGTTACTGCCACGGCTTATCGGTTGAAGATGGCTGGAACGCGTGTCTTGACCGATGATTTTTATTTGGGTTTTATCCATCCAAGTGAGCGCGATGCTGAACCGCGACTTGGGCAAATTTTGCATGCTCGCGTGATCGGGGTTAGTGCCAATGGCGAGCTGAATTTGTCGCTAAAACCACGTGCCTATCAGGCCATCGGTGATGATGCTGGCATGATCTTGGCAGTTTTGCAGCATGATCCTTCAGGAAAAATTGCTTATACGGATAAGAGCGATCCTGAAGCGATTAAGCAAACCTTTGGCATCAGTAAAGGCGCCTTTAAGCGCGCACTGGGCCATTTGTTGAAGGCTGGCTTAGTGAAAGAGGAAGCTGGGTATACGATTTTGACGGCCGCAGCCAAGGCGTCTCGGGAGTAA
PROTEIN sequence
Length: 293
MNFNGSIVTAQVTDHNDTEVFAQHDGVTLAIDRSELAELPEVGSDVEGFAYENKQGQARLTTKVPTVGRDHYAFAKVVEVRKDLGVFVNIGLPDKDIVVSEDQLPEISRLWPQKGDQLMVALTVDKKDRMWGNLADESIIHAVANRAKPEQMNADVTATAYRLKMAGTRVLTDDFYLGFIHPSERDAEPRLGQILHARVIGVSANGELNLSLKPRAYQAIGDDAGMILAVLQHDPSGKIAYTDKSDPEAIKQTFGISKGAFKRALGHLLKAGLVKEEAGYTILTAAAKASRE*