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L3_072_000G1_scaffold_278_16

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 17886..18650

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=194 Tax=Clostridium difficile RepID=C9XM01_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 254.0
  • Bit_score: 483
  • Evalue 1.30e-133
sigF; RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 254.0
  • Bit_score: 483
  • Evalue 3.60e-134
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 254.0
  • Bit_score: 483
  • Evalue 1.80e-133

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 765
ATGGAAGTAACTGTTGCCAGAGAAGAAAAAAAACCTCTTCTTAGTCATGAAGAGACTCTAGAACTTATTGAAAAAGTTCAAAATGGAGATGAAGAGGCAAAAGAAATATTAATATCAAGCAATTTAGGTCTAGTTAGGAGCGTTGTATCTAGATTTTTAAATATAGGATATGATAGAGAAGATTTATTTCAGTTAGGTTCTATAGGCTTAATAAAATCAATATATAAATTTGACCCAAAATTTAATGTAAAATTCTCTACTTATGCAGTACCAATGATTTTAGGTGAAATAAAGAGATACTTAAGAGATGATGGTATGATAAAAGTATCAAGGTCGTTAAAGCAAATAGCTGTAAAGGCAAAGATGGAAAGTGAAGCTTTAACTAAAAAATTAGGTAGAGAGCCGAGTATAGAAGAATTAGCTAAAGCAATAGATGTAGAAAAAGAAGATTTAGTAATGGCTATGGAAGCTAATTTCAATGTTGAGTATTTGCAAGGAGTTATTCATGAAGAGGAAGGTTCTCCAATATGCCTTATTGATAAAATAAGCATGAAAGGAGAAAGTGAAGAAGAAAAAGTAGTGGATAATATATTGTTAAAAGACATACTTGGAAGACTGGATAAGAGAGAGCGTCAAATAATAGTTCTCAGATACTTTGAAGACATGACTCAAAGTGAAATAGGAGAGATGCTCAATATATCACAAGTTCAAGTATCTAGGATAGAGAAGAAAGTATTGTCTAAGTTAAAAGAATATATATCATGA
PROTEIN sequence
Length: 255
MEVTVAREEKKPLLSHEETLELIEKVQNGDEEAKEILISSNLGLVRSVVSRFLNIGYDREDLFQLGSIGLIKSIYKFDPKFNVKFSTYAVPMILGEIKRYLRDDGMIKVSRSLKQIAVKAKMESEALTKKLGREPSIEELAKAIDVEKEDLVMAMEANFNVEYLQGVIHEEEGSPICLIDKISMKGESEEEKVVDNILLKDILGRLDKRERQIIVLRYFEDMTQSEIGEMLNISQVQVSRIEKKVLSKLKEYIS*