ggKbase home page

L3_072_000G1_scaffold_471_3

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 3116..4858

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 580.0
  • Bit_score: 866
  • Evalue 1.70e-248
Transcription termination factor Rho n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V2_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 511.0
  • Bit_score: 799
  • Evalue 1.40e-228
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 511.0
  • Bit_score: 799
  • Evalue 3.90e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. ASBs410 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1743
ATGCGTGAAAAATTACAGACACTCCCCCTAGCGGAATTGAAGGAGCTAGCCAAAGCCAAAGGGATTAAAGGCTGCAGTTCCATGCGAAAAGCTGAAATTATAGATTTACTTTGTGAAAAGGAAGAAGAAAATTCTCCGGTTCGTGTTTCAGACGGGAATGCTTCACAGGAAAATAAAGAAGATAATAAGGATATAATGAAATCAACCATAGCATCATCTACGTCAAATATATCATCTTCACCCGTACCAGCACCTGCAACTACAACTGCAACTACAACTGTACCTACATCTGCAACTGCGCCTACAACTTCATCTACAACGGCACCGGTAAATGCGCCTGCATCAGCGTCAACGGGTCAAAGCCAGGGTATGGTGGATCAGCAAGGATATTCCTCTGGAAACAGCCAGAGAAAGACAGTTGTTCGATCTTATCGGCCAGAAACACAGCAGAGACCTGCTCCATACCGTTCTGCGCCAGCTAACTCATCCTCTGCAAATTCCGCACCTGCCTATACTTCAGAAGCTCCGGTTCGCAATGAGTCACGTTTAGACTATAATGCAGAAGAAGTAAAGCCTGATTTTCAGCCCAGCCCTGAACTGCAGGAATTAGACAGCGGAATCGATGCACATGGTATTTTAGAAGTTATGCCGGACGGATTTGGATTTATCCGCTGTGAAAATTATCTGCCTGGGGAAAATGATGTTTATGTTGCACCTTCCCAGATCCGCCGTTTTAATATGAAAACGGGAGATATCATTCATGGAAGCAGAAGAGTGAAATCAGCGACTGAGAAGTTTGCTGCTTTGCTGTATGTAAAGAAAATCAATGGTTTTCCAGCCAGTGTGGCAGAACGCCGTCCAAATTTTGAAAATATGACTCCCATTTTTCCGGATAAAAGACTTCATATGGAAACACAGGGAGGAAAGAATACCACAGCCATGCGTGTTTTAGATCTTCTGGCCCCCATTGGAAAGGGACAGAGAGGAATGATCGTATCTCCTCCAAAAGCCGGTAAAACCACATTGCTGAAGCAAGTGGCAAAGGCCATTACCCTTAACCATCCTGAGATTCATCTTATGATTCTTCTCATTGATGAGCGTCCGGAAGAGGTTACAGATATTAAAGAATCCATTGTGGGAGATAACGTTGAAGTTCTATATTCCACCTTTGATGAGCTTCCAGAGAGACATAAGAGAGTATCCGAAATGGTGGTGGAACGGGCGAAGCGTTTGGTTGAGCATGGGCGTGATGTGGTCATTTTACTTGACAGCATTACCCGTCTAGCCAGGGCCTATAACTTAACTGTGGCGCCAAGCGGACGTACCTTATCCGGTGGTCTTGATCCGGCCGCTCTTCATATGCCCAAGCGCTTCTTTGGCGCAGCCAGAAATATGAGAGAAGGCGGAAGCCTTACCGTTTTAGCTACCGCCCTGGTGGATACAGGAAGCCGTATGGATGATGTCATATATGAAGAATTTAAAGGAACCGGAAATATGGAACTGGTTCTTGACAGAAAGCTGTCTGAAAAGAGAATATTCCCTGCCATTGATATCTTAAAGTCTGGTACCAGAAGAGACGATTTGCTGCTAAGCAGAGATGAGGCAGAGGCAGTGGACAATATCCGCAAGGCTACCAATACGTTAAAGCCAGAGGATGCAGTAGAAAAAATTCTCGATTTGTTCTCCAAGACAAAAAACAACTGGGAATTTGTCGAGGCTTCCAAGAAAATGCGGTTTTTCTAG
PROTEIN sequence
Length: 581
MREKLQTLPLAELKELAKAKGIKGCSSMRKAEIIDLLCEKEEENSPVRVSDGNASQENKEDNKDIMKSTIASSTSNISSSPVPAPATTTATTTVPTSATAPTTSSTTAPVNAPASASTGQSQGMVDQQGYSSGNSQRKTVVRSYRPETQQRPAPYRSAPANSSSANSAPAYTSEAPVRNESRLDYNAEEVKPDFQPSPELQELDSGIDAHGILEVMPDGFGFIRCENYLPGENDVYVAPSQIRRFNMKTGDIIHGSRRVKSATEKFAALLYVKKINGFPASVAERRPNFENMTPIFPDKRLHMETQGGKNTTAMRVLDLLAPIGKGQRGMIVSPPKAGKTTLLKQVAKAITLNHPEIHLMILLIDERPEEVTDIKESIVGDNVEVLYSTFDELPERHKRVSEMVVERAKRLVEHGRDVVILLDSITRLARAYNLTVAPSGRTLSGGLDPAALHMPKRFFGAARNMREGGSLTVLATALVDTGSRMDDVIYEEFKGTGNMELVLDRKLSEKRIFPAIDILKSGTRRDDLLLSRDEAEAVDNIRKATNTLKPEDAVEKILDLFSKTKNNWEFVEASKKMRFF*