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L3_072_000G1_scaffold_725_18

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 19920..23447

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1175.0
  • Bit_score: 2304
  • Evalue 0.0
Transcription-repair-coupling factor n=4 Tax=Lactobacillus rhamnosus RepID=C7TMD0_LACRL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1175.0
  • Bit_score: 2304
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1175.0
  • Bit_score: 2304
  • Evalue 0.0

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Taxonomy

Lactobacillus rhamnosus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3528
ATGAATTTAATCGACATGGTGCAGGCAGATCCGGAACTGTCGGCATTATGGCCTAAGCTCGAGACAGGCCGCCATTTGGTGACAGGACTATCAGGTTCGGCCAAGACGGTCTTTTTTGGCGCACTCTTGCAGCAGCAAAAAAAGCAGCTGCTGATTGTCGAAAATAATCGGTTTCATGCAGACGAGTTGGCAGCAGATTTGAGTAGTTTATTAGGCGATGCGCTTGTTTATGATTTTCCGGTTGAAGATGTATTGGCGGCTGAAGTGGCGGTCAGTTCACCGGAAACCCGCAACGACCGGATCAACGCACTGACCTTTATTCAAAGCGGCCAACCGGGCATTATTGTTACCAGCCTGGCAGGATATAAGCGAATTTTACCCGCACCGGCTGCATGGGCGGCAAGTGAGTTGGTTGTTGATATGGATTCAGAGCTTGATCCGCAAACGGTCGCCAAGCAGCTTGTGGCGATGGGTTATCGGCGTGATTCATTAGTGAGTGCGCCCGGCCAATTTGCCATTCGCGGTGGGATTATCGATATTTATCCATTAAATCAGGATGATCCGATTCGCATTGAGTTGTTTGATACGGAAATCGACTCGATTCGCAGCTTCGACATTGCTACCCAGCGCAGTTTGAAAAAGCTTGATCAGATTGTCATTGCACCGGCTACTGACATGATCGCTTCCGATCAGGTGCTGACCGATGCCGGTGCGCGAATCGGTAAGCAGGCAACAGCTTACAAAGCGAAAGTCAAGGATGCAGCGGCAAAGCAAGCGATTACCGATGGCTTGTTGACGACCAGCCAGCAGTTACAAGCATTAGAACGGCCAGAAAACCTGGCATTGTATGCGCCGGAGCTGTATCCGGAACATCACCGCATTACTGATTATCTTGCCGGTGATGCGCTGGTAGCGTTTGATGATTACAGTCGCCTGTTGGATAGTGATACGAATTTGGTGCAGGATACGGCTGAATGGTATTCACAGCTGCAAGAGGAAGGCCGTTTGTTGCCTAAAACACCTAATCCTACGATCCAAGCGCTTAATCAGCGTGATCGGCATCCGCGGCTTTACTTGAGCCTTTTCCAAAAAGGAATGGGTCAGTTGCGGTTGGATAGCTTGACTAACGTGCCGAGTCGCAATGTTCAACAATTCTTTAGTCAGATGCCATTGCTCAAAACCGAAACGGATCGGTGGGTGAAACAAAAGCAGACCGTGGTTTTCCTGGTTTCCGATAAGAACCGTTTGGATAAGCTGAGTGCTACTTTACATGATTTTGAGATTAGTAATGTGGTGACCGAACCTAATCAGCTGCTTTCAGGAAAAGTTCAGTTAACCGATGGCAGTCTGAAGAACGGCTTTGAATTGCCGGATTTGAAGCTGGTAGTGGTGACAGAACACGAGCTGTTCAATGCTCGGCAGCGGCGGCGGGCTCGCCATCAGACGTTGGCAAATACGGAACGCCTCCGCAGCTATAATGAATTAAAGCCTGGCGATTATGTTGTTCATGTCAACCACGGGATTGGGCAATATACCGGCATGGAGACGCTTGAAGTTGACGGTGTCCATCGCGATTACATCACCATCGTTTATCGCAACAATGACAAACTGTTTATTCCGGTTGACCAATTAAATCTGGTTCAGAAATATGTTTCTGCAGATGGCAAAACGCCTAACGTCAATAAGCTTGGCGGTACCGAGTGGCAAAAGACCAAACGCAAAGTGGCGGCTCGAATCGAAGACATTGCCGACGAGCTGATTGACTTGTACGCAAAACGGGAAGCGGAAAAAGGTTATGCTTTCGGGCCGGATGATGATCTGCAGCAAAAATTTGAAGATGAGTTTCCTTATCCCGAGACGCCTGATCAACTGCGATCGGCAAAAGAAATTAAGCGGGATATGGAGAAACCCAAACCCATGGATCGCTTGCTTGTCGGGGATGTGGGCTTTGGCAAAACCGAAGTCGCGTTACGGGCAGCATTTAAAGCAGTTGACTATGGTAAGCAGGTCGCAATTTTAGTACCGACTACCATCTTGGCGCAGCAACATTTTGACACCATGAAGGATCGATTTGCCGATTTTCCGGTTAAAATCGGCTTGTTATCGCGCTTCCAGACACCGCATCAAAATAAAATGACGATTAAAGGACTCAAAAACGGCACGATTGACATTGTTGTCGGCACCCATCGACTGCTTTCTAAAGATGTGGCATTTCGTGACCTCGGTTTGTTGGTGATTGATGAAGAGCAGCGTTTTGGGGTGAAGCACAAGGAACGGATTAAGCAACTGAAAAGCAATGTGGATGTGTTAACGCTGACGGCAACGCCAATTCCACGTACGCTAAACATGTCGATGCTTGGCGTGCGGGACTTAAGTGTCATTGAGACGCCACCGACAAATCGCTATCCGATTCAGACCTTTGTGATGGAGCAAAACCCCGGGGTCATTCGGGAAGCCATCGAACGCGAAATGGAACGCGGTGGTCAAGTCTTTTACCTGCATAATCGGGTGGAGGATATGGAGCGAACCGTGAGTCAATTGGAAGAGCTAGTGCCTGACGCTAGCATCGGGTATGCCCACGGTCAGATGACGGAAACCCAGCTGGAAAATGTCATCTATGATTTTCTGCATGGCGCGTATGACGTATTAGTGACCACGACCATTATTGAAACCGGGGTCGATATGCCGAACGCCAATACGCTGATTATTGAAAATGCGGATCATTATGGATTGTCCCAGTTGTATCAGTTACGCGGACGTATCGGGCGTTCCAGCCGTGTTGCTTACGCTTATTTCATGTATCAACCGATGAAGGTACTTAATGAAGTGGCCGAAAAACGGCTGCAGGCGATTAAGGATTTCACGGAATTAGGTAGCGGCTTTAAGATTGCGATGCGTGATTTGTCGATTCGCGGTGCGGGGAACTTGTTAGGCAAACAACAGCATGGATTTATTGATTCGGTTGGGTATGACTTGTACACGCAGATGTTACAAGAGGCGGTTAACAAACGCCGCGGACTTAAAACCGTTCAAAAAACCGATGCGGAAATCGACTTGGGTCTGGAAGCATACCTGCCAACGGATTATGTTGCCGACTCGCGCCAGAAAATTGAACTGTACAAACGGATTCGTGAAGCAGACAGTGATGAAGCCGAAACCGAGATTAGTGAAGATTTGATTGATCGATTCGGCGATTATCCACAGCCGGTGACGAATCTTTTGGCAATCGCACATCTGAAACGTTTCGCTGATTTGGCTTGGGTGGATCACGTCCAGAAAAACGACCAGAAAATGACGGTGGTGTTAACCCCGCAAGCGACTGCTAAAGCACAAGGCGAACCGATCTTCAAGGCGTTGGCGGCTACGACTTTGAAAGCACAAGTAGCAATTGCCGATGGAAAGCTGACGGTAACGCTCGCTGTGCCAGCAACCATGAAAGAAGACGAGTGGCTAGGGCAACTAACTGCTTTCATGAAGGGATTGCTGGCGGTTGTGAATCCGCAGCCGGGAAAAAAGCCTGCCGCCTAA
PROTEIN sequence
Length: 1176
MNLIDMVQADPELSALWPKLETGRHLVTGLSGSAKTVFFGALLQQQKKQLLIVENNRFHADELAADLSSLLGDALVYDFPVEDVLAAEVAVSSPETRNDRINALTFIQSGQPGIIVTSLAGYKRILPAPAAWAASELVVDMDSELDPQTVAKQLVAMGYRRDSLVSAPGQFAIRGGIIDIYPLNQDDPIRIELFDTEIDSIRSFDIATQRSLKKLDQIVIAPATDMIASDQVLTDAGARIGKQATAYKAKVKDAAAKQAITDGLLTTSQQLQALERPENLALYAPELYPEHHRITDYLAGDALVAFDDYSRLLDSDTNLVQDTAEWYSQLQEEGRLLPKTPNPTIQALNQRDRHPRLYLSLFQKGMGQLRLDSLTNVPSRNVQQFFSQMPLLKTETDRWVKQKQTVVFLVSDKNRLDKLSATLHDFEISNVVTEPNQLLSGKVQLTDGSLKNGFELPDLKLVVVTEHELFNARQRRRARHQTLANTERLRSYNELKPGDYVVHVNHGIGQYTGMETLEVDGVHRDYITIVYRNNDKLFIPVDQLNLVQKYVSADGKTPNVNKLGGTEWQKTKRKVAARIEDIADELIDLYAKREAEKGYAFGPDDDLQQKFEDEFPYPETPDQLRSAKEIKRDMEKPKPMDRLLVGDVGFGKTEVALRAAFKAVDYGKQVAILVPTTILAQQHFDTMKDRFADFPVKIGLLSRFQTPHQNKMTIKGLKNGTIDIVVGTHRLLSKDVAFRDLGLLVIDEEQRFGVKHKERIKQLKSNVDVLTLTATPIPRTLNMSMLGVRDLSVIETPPTNRYPIQTFVMEQNPGVIREAIEREMERGGQVFYLHNRVEDMERTVSQLEELVPDASIGYAHGQMTETQLENVIYDFLHGAYDVLVTTTIIETGVDMPNANTLIIENADHYGLSQLYQLRGRIGRSSRVAYAYFMYQPMKVLNEVAEKRLQAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYTQMLQEAVNKRRGLKTVQKTDAEIDLGLEAYLPTDYVADSRQKIELYKRIREADSDEAETEISEDLIDRFGDYPQPVTNLLAIAHLKRFADLAWVDHVQKNDQKMTVVLTPQATAKAQGEPIFKALAATTLKAQVAIADGKLTVTLAVPATMKEDEWLGQLTAFMKGLLAVVNPQPGKKPAA*