ggKbase home page

L3_072_000G1_scaffold_296_19

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 19506..21065

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 519.0
  • Bit_score: 980
  • Evalue 5.50e-283
Ribonuclease Y n=4 Tax=Lactobacillus fermentum RepID=B2GB16_LACF3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 519.0
  • Bit_score: 980
  • Evalue 3.90e-283
2',3'-cyclic-nucleotide 2'-phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 519.0
  • Bit_score: 980
  • Evalue 1.10e-283

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus fermentum → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1560
ATGAATGCAATCAGCTTATTAATCGCCGCTGTCGCTATTGTTGTCGGTCTAATTGCCGGTTACGTGGGTAGGAAAATCGTTTTCGAACAACGATTAACCCAGGCGAAGGAAAACGCCGCGGGGATTATTGCAACTGCCCAAAAGGAGGCGGCGACGGCGAAAAAGGAGGCCATTTTAGAGGCCCGAGAAGAAAGCCATCGCTACCGGGAAGTCGTGGAACAAGAACTCAAGGACCGTCGTAGTGAGGTCCAAAAACAAGAAGAGCGCTTGCTCCAACGCGAAGCAACCCTTGACCGCAAGGACACCAGTCTGGAGAACCGCGAAACTACGATCAGCGCCCGGGAACGGAAGCTCGATCAAAAGACGGAGCAGATTCAAAAGCGTCAACAACAGGCAGCGGATTTAGTCGAGCAGCGCCAAGCCGAGCTCGAAAAGGTCGCCCAGCTATCACACGAAGAGGCCAAAAAACGGCTCCTTTCGCAACTAAAAGAAGAGTTGCAAAGTGAACGGGAAACGATGATTCGGCAAAGCGAACAAGAAGCCGAATTAACGGCGGAAAAGAACGCCAAGGACTTAATCGTGGCCGCAATTCAACGCTCAGCCGCGGATATGGTTCAAGAAACCACCGTGACCGTAGTAACCCTCCCCAATGACGACATGAAGGGGCGGATCATTGGGCGCGAGGGCCGTAACATCCGGACCTTAGAAACCCTGACCGGGATCGACCTGATCATCGATGACACGCCGGAAGCAGTCGTCTTATCCGGGTTTGACCCGGTACGGCGTGAGATTGCCAAGATGGCCCTGGAGCGCTTGATCCAAGACGGCCGGATTCACCCGGCCCGGATTGAGGAGGCGGTTGAACGGGCCCGCAAGGACATGGATACCCAGCTGCGTGAAGTCGGGGAGCAAACGGTCTTTGACCTAGGCCTGCACACCATGCACCCGGACCTGATTAAGACGGTTGGGCGAATGAAGTACCGGACCAGTTACGGTCAAAACGTCTTACAGCACTCAATTGAAGTCGCCAAGTTAGCGGGGATCATGGCCGCTGAGCTCGGTGAAGACGTGACCCTCGCTAAGCGGGCCGGCCTCCTGCACGACATTGGTAAGGCCATCGACCACGAAGTTGATGGTTCCCACGTTGAACTAGGGGTGGAACTAACCCGCAAGTACAAGGAGAACAAGGTCGTTATTAATACGATCGCATCTCACCACGGCGACGTGGCGCCAACCTCGATCATTGCCGTCCTGGTTCAGGCTGCCGATGCCGTTTCCGGGGCCCGTCCTGGTGCCCGTAGTGAGTCGTTGGAACAATATATTCAACGACTCAAGAAGCTAGAGGAGTTGGCCAACCAAAATAGCGGCGTTGATCATTCGTACGCTATCCAGGCTGGCCGCGAGATTCGCGTGATTGTCAAACCAACCAAGGTTTCCGATAAGCAAGCGGTCACCTTGGCCCACGACCTCAAGCAAGAGATTGAAAAGCAACTTGAATACCCAGGGCACATTAAGGTGACGGTAATTCGGGAAACCCGGGCCGTCGATTATGCCAAGTAG
PROTEIN sequence
Length: 520
MNAISLLIAAVAIVVGLIAGYVGRKIVFEQRLTQAKENAAGIIATAQKEAATAKKEAILEAREESHRYREVVEQELKDRRSEVQKQEERLLQREATLDRKDTSLENRETTISARERKLDQKTEQIQKRQQQAADLVEQRQAELEKVAQLSHEEAKKRLLSQLKEELQSERETMIRQSEQEAELTAEKNAKDLIVAAIQRSAADMVQETTVTVVTLPNDDMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVVLSGFDPVRREIAKMALERLIQDGRIHPARIEEAVERARKDMDTQLREVGEQTVFDLGLHTMHPDLIKTVGRMKYRTSYGQNVLQHSIEVAKLAGIMAAELGEDVTLAKRAGLLHDIGKAIDHEVDGSHVELGVELTRKYKENKVVINTIASHHGDVAPTSIIAVLVQAADAVSGARPGARSESLEQYIQRLKKLEELANQNSGVDHSYAIQAGREIRVIVKPTKVSDKQAVTLAHDLKQEIEKQLEYPGHIKVTVIRETRAVDYAK*