ggKbase home page

L3_072_011G1_scaffold_48_11

Organism: L3_072_011G1_public_UNK

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(9777..10256)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector, Hcp1 family n=41 Tax=Escherichia coli RepID=B3HQC3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 323
  • Evalue 1.00e-85
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 323
  • Evalue 2.90e-86
Hcp1 family type VI secretion system effector {ECO:0000313|EMBL:ELJ76877.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 323
  • Evalue 1.50e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGCAAATCCCGTCTATCTGACACTGAACGGAGAACTTCAGGGGCTGATTTCATCCGGATGCTCGTCAATGCCGTCCATCGGTAACAAAGCCCAGATTGCACATCAGGATCAGATCATGGTGACGTCACTGTCCCATGGTCTGAGCCGTGCGCAGAATGTCAACCATCAGGAGTTGACCATCACGAAACCGGTGGACAAATCCTCCCCTCTGCTGGGCAAGGCCATTTCAGAGAATGAATGTCTGACCTGTGATTTTGTATTCTACCGCACCAACCGCTTTGGAATTAATGAACCGTACTACAAGCTGAAACTGGCTAACGCCCGGCTCTCAAACATCGGCCTTACCATTCCCCATACCATTAACGACAGTCCTGGGCAGGCGGAAGAGTCTGTGTCATTTACCTATGAGAGCATCAATTGGGAGCACAGCGTCGCCGGAACCAGTGCATACAGCCTTTGGAGTGAACGGATTTTCTAA
PROTEIN sequence
Length: 160
MANPVYLTLNGELQGLISSGCSSMPSIGNKAQIAHQDQIMVTSLSHGLSRAQNVNHQELTITKPVDKSSPLLGKAISENECLTCDFVFYRTNRFGINEPYYKLKLANARLSNIGLTIPHTINDSPGQAEESVSFTYESINWEHSVAGTSAYSLWSERIF*