ggKbase home page

L3_079_000G1_scaffold_193_26

Organism: L3_079_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: comp(33276..33806)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium RepID=D4CA80_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 326
  • Evalue 1.40e-86
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 326
  • Evalue 1.90e-86
RNA polymerase, sigma subunit, SigV similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 160.0
  • Bit_score: 164
  • Evalue 2.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:149 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 531
TTGGCGGCCGGGGAAAATAAAATTGGAAAGGCAGAGAATATGGGACAGAGCATATATGACAGTACAGTTGCCTACATTCTGGAAAACCAGAACCGGTTTTACAGACTGGCGTACAGCTATGTGGGTGACAGAGAGGCGGCGCTTGATGTGGTGCAGAACGCGATTCTGAAGGGGCTTGAAAAGTGTGAAACCCTGAGGAGCACAGATGCGCTGAAAACATGGTTTTACAGGATCGTAGTGAATGAATCTCTTCAGCTTCTGAGGGACAGAAAACGGGAATTGCCTTCCACGGACGGCGGCGTGTTCGACCGGCCCTATACGGAGCCGGCCTACGATCGGGAGAGAGAGGTCTATGAAGCGGTAAAAAAACTGCCGGAGCCGGGAAGAACAGTGGTAGTTCTTCACTACTACGAGGAACTGACCTTAAAGCAGATTGCAGAGATCACAGATGCGAATCTGAATACAGTCAAGTACAGGCTGTACTCATCGCTGGAACGTCTGAAAAAAGGATTAAAGGAGGGAAGGCCGTGA
PROTEIN sequence
Length: 177
LAAGENKIGKAENMGQSIYDSTVAYILENQNRFYRLAYSYVGDREAALDVVQNAILKGLEKCETLRSTDALKTWFYRIVVNESLQLLRDRKRELPSTDGGVFDRPYTEPAYDREREVYEAVKKLPEPGRTVVVLHYYEELTLKQIAEITDANLNTVKYRLYSSLERLKKGLKEGRP*