ggKbase home page

L3_079_062G1_scaffold_357_17

Organism: L3_079_062G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(25762..26358)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=8 Tax=Bacteroides fragilis RepID=I3HLP8_BACFG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 401
  • Evalue 4.90e-109
putative ECF sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 401
  • Evalue 1.40e-109
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD49819.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 401
  • Evalue 6.90e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGACTACTACTAGGATAAGCGAACAAATAATAGATGATATAAATGAAGGAAAAGAAAATGCCTTTTCTGCTTTATATGATTGCTATTATAGTTATTTATGCGCTTATGCTACTACTTACGTATTCGATCCGGATGAGGCAAAGGAAATCGTTAATGATGTTTTTATGAATATCTGGAGCAGTAGAGGTCAGTTAAGTTTCCCTATTCATAATTACCTATTGCGAAGTGTACAGAATCGTTGTTTGAATTACATCCGTACTTTACATACACGAGAACGTGTGCTTGATGAGTATCGGGAGGAACTGATTGCTTTTCAGGAAGAATTCTGCAAAAATGATAATAACCCGTTGCAATTATTGGAGATAGAGGAACTGAAAAGTCAGGTTAACACGGTGATAGACTCTCTATCCGTAAAATGTCGCCTAGTTTTTGAAAAATACTTGTATGAAGGTATGTCTCCTCAGGAGATTGCTGATGAACAGGCCATATCGGTAAATACGGTGCGTGTTCATATCAAGAATGCGATGGATCATATTAAACTTCAATTGGGCCCTACTGCAGGCATACTGTTTTTGTTTCTTTACGGGAGGCTTTGA
PROTEIN sequence
Length: 199
MTTTRISEQIIDDINEGKENAFSALYDCYYSYLCAYATTYVFDPDEAKEIVNDVFMNIWSSRGQLSFPIHNYLLRSVQNRCLNYIRTLHTRERVLDEYREELIAFQEEFCKNDNNPLQLLEIEELKSQVNTVIDSLSVKCRLVFEKYLYEGMSPQEIADEQAISVNTVRVHIKNAMDHIKLQLGPTAGILFLFLYGRL*