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L3_079_062G1_scaffold_23_26

Organism: L3_079_062G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 34497..35858

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 454.0
  • Bit_score: 849
  • Evalue 9.10e-244
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 454.0
  • Bit_score: 849
  • Evalue 1.30e-243
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 448.0
  • Bit_score: 674
  • Evalue 1.90e-191

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Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGAAGGGAGAATCTGTGCCAAAAAAGAGTGAGAGCACGGGTACTGGGCTGGAATCCTACGTTGCAAAGCTCATGGGCAACGGCTCAAACAGGACTTCGGTAACCGAGGACGAGATTCAGGTCGCCCTGAAGGATATCGATGTGTCTGACGAGCAGCTCAACGCGGTGTATTCCGCGCTGCGCAACAGCGGCATCCAGATTATCTCCGCGAGCGGAAACGACGACGCCCCCATGGACGTCGACGATGACGATAACGATAGCGATACCGACGATTTCGATGACGACGAGCACGATTCCGGTTCGCTCGACGATCACGAGCTCAAGATGGCCCGTCAGGCCGATGCCGAGATGGGTTCTTCCAAGAGCAAGAAGAAGCGCACCGTGCGCACGTCCCGTTCGCGTTCGCGCGTGCGTGGCATCGATGCCTCCACGGTGATGCTGACCGGCGACCCGGTCCGTATGTACCTTAAGGAGATCGGCAAGGTCGACCTGCTGACCGCCTCCGAAGAGGTCGATCTGGCCATGAAGATCGAGGCCGGTCTCGATGCCACCGAGAAGCTCGAGGCCGCCGAGGCGGGCGAGATTGAGCTCACCCGCGCCGAGATGCGTCGCCTGACCCGTATCGAGAACGTCGGCCTCGAGGCCAAGCAGGCGCTCATCAGCGCCAACCTGCGTCTGGTCGTCTCCATCGCCAAGCGCTATGTCGGCCGCGGCATGCTGTTCCTGGACCTGATCCAGGAGGGCAACCTCGGTCTGATCCGCGCCGTCGAGAAGTTCGACTACCAGAAGGGCTTTAAGTTCTCCACGTACGCCACGTGGTGGATCCGCCAGGCCATCACGCGCGCTATCGCCGACCAGGCCCGTACCATCCGTATTCCCGTGCACATGGTCGAGACCATCAACAAGCTCGTCCGCGTGCAGCGCCAGCTTCTCCAGGACTTGGGTCGCGACCCGACCCCCGAGGAGATCGGTGCCGAGATGGACATGAGTGCCGATCGCGTCCGCGAGATCCAGAAGATTTCGCAGGAGCCCGTGTCGCTCGAGACCCCCATCGGCGAGGAAGAGGATTCCCAGCTGGGCGACTTCATCGAGGACTCCCAGGCTATCGTTCCGCCCGATGCCGCCAGCTTCTCCATGCTGCAGGAGCAGCTCACCCAGGTGCTCGATTCGCTTGCCGATCGCGAGCGCAAGGTTATCGAGCTGCGCTTTGGCCTTGTCGACGGACATCCCCGCACGCTCGAGGAAGTCGGTCGCGAGTTTGGCGTCACGCGCGAGCGTATCCGCCAGATCGAGTCCAAGACCCTGGCCAAGCTCCGCCACCCGAGCCGCAGCAGCAAGCTCAAGGACTACATCGAAAGCTAG
PROTEIN sequence
Length: 454
MKGESVPKKSESTGTGLESYVAKLMGNGSNRTSVTEDEIQVALKDIDVSDEQLNAVYSALRNSGIQIISASGNDDAPMDVDDDDNDSDTDDFDDDEHDSGSLDDHELKMARQADAEMGSSKSKKKRTVRTSRSRSRVRGIDASTVMLTGDPVRMYLKEIGKVDLLTASEEVDLAMKIEAGLDATEKLEAAEAGEIELTRAEMRRLTRIENVGLEAKQALISANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYQKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVQRQLLQDLGRDPTPEEIGAEMDMSADRVREIQKISQEPVSLETPIGEEEDSQLGDFIEDSQAIVPPDAASFSMLQEQLTQVLDSLADRERKVIELRFGLVDGHPRTLEEVGREFGVTRERIRQIESKTLAKLRHPSRSSKLKDYIES*