ggKbase home page

L3_079_363G1_scaffold_78_15

Organism: L3_079_363G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(20098..20652)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=11 Tax=Bacteroides RepID=Q64P59_BACFR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 371
  • Evalue 3.00e-100
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 371
  • Evalue 8.40e-101
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:EXZ52113.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 371
  • Evalue 4.10e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGGCAAAATTAACGATATTCCGGTTTCGTGGACATATTTCACGGGAAGAACGCTTCAGGCAATTGTTTGTGGAGATATATCCCCGCCTGTTGCGTTATGCCATTCAGCTAATGAGCGATCGGGAAGAAGCGAAGGATATTGTTGGCGAAGTGATGGAAGAGGCTTGGAAATGTTTTGATAGACTGGAGGCGGAAACGCAGAACGCTTATTTCTATACAGCTACACGTAATACGTGCCTGAATCGGTTAAAGCACCTGCGTGTGGAACAGCAGCATTTGGATACTTTACGTGAGGTGACCCGGATGGATGTGAATACCGGATATCGGCAGCATGAGGCACAGTTGCAGCAAGCGGAAACGATTGCTTGCAGTCTGTCGGAACCGACGCGTACCATTTTGAGACTTTGTTATTGGGAGAAACTGACCTATCGGCAAGTTGCAGAACGGTTGGAAATAAGTCCGGATACGGTGAAAAAACATATTTCGAAAGCTTTACGGATTTTACGTAATGAAATGAACGGAAAGGAGGAAACAAATGGAACAGAGAGAGGATAA
PROTEIN sequence
Length: 185
MAKLTIFRFRGHISREERFRQLFVEIYPRLLRYAIQLMSDREEAKDIVGEVMEEAWKCFDRLEAETQNAYFYTATRNTCLNRLKHLRVEQQHLDTLREVTRMDVNTGYRQHEAQLQQAETIACSLSEPTRTILRLCYWEKLTYRQVAERLEISPDTVKKHISKALRILRNEMNGKEETNGTERG*