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L3_082_090G1_scaffold_367_2

Organism: L3_082_090G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(1229..4594)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 1121.0
  • Bit_score: 2189
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 1112.0
  • Bit_score: 1667
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ34_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 1121.0
  • Bit_score: 2189
  • Evalue 0.0

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Taxonomy

Ruminococcus gnavus CAG:126 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3366
ATGATGCAGGCTTTTATCGCACCGCTTGCGGAACTTGCAGAATATCAGGAGATTTTACAGAAGCGAAGGAAAGAAAAGGGGATTCTGCAGATCGCAGGCTGTGTCAATTCACAAAAAACACATTTGATGTATGCGCTTGGCGATGGTTTTTCTTACAAGATCATCGTTTTTTCCAGTGAAGAAAAAGCGCAGAAGGCATATGAAGAATATCGCTTTTTAGATTCCGGGGTATTGTATTATCCGGCAAGAGATTTGTTGTTTTACCATGCGGATATCAAAGGAAATTATCTGATGAAGCAGCGGATGGAAGTGATTCGCAGTATGGTGACAAGACAAAAGAATCAGGAGATTACAGTGATCACGACTATGGATGCTTTTCTGGACGGGCTTTCTCCGGCAGAGGAGATCGTTTCGAAGCGGATTCAGATCTCATCCGGAGATACTGTTGATTTTACTAAGCTTCAGGAGAGACTTTCCGGTCTTGGGTATGTGCGGGAAGTACAGATTGAAGGACCGGGGCAGTTTGCAGTGCGCGGCGGAATCCTGGATATTTTTCCGCTTACAGAAGAGATTCCGGTGCGTGTGGAGCTCTGGGGCGATGAGGTAGATTCGATCCGGACATTTGACGTAGAAAGTCAGCGTTCGATTGAAAACCTGAAGGAAATTGAGATTTATCCGGCAGCAGAACTGCAGAGTCAGAAGAAGCAGTCTTTTCTGGAGTATTTTCCGACAGAAGAGTCGATCCTGTTTCTGGATGAGCCGCAGAGGCTGATTGAAAAAGCAAATGAGATTGAAGAGGAATTTCAGGAGAGCGTCCGCAAGCGGGAAGAGGCCGGGCTGGAAGAAACGCAGGAGCTTACGGTATATCCGGTGCTGGAAATCTTAAACCGGATCAATCAGTTTTACGGAGTGGCATTTACCGCGCTGGAAGGAAAATGCAGGGGGTTAAAGATCCGGGAAACAGATTATATTCAGACGAAGGGTGTCAATCCGTATAACAACAGTTTTGAGATGCTCACAAGGGATTTGAAGCGGCTGAAAAGAAATCAGTACCGGGTGATCTTGCTGTCCGGTTCCAGGACAAGAGCAAAGCGCCTGGCGGAAGATCTGAGGGATTATGATCTGAGCAGTTTCTACAGCGAAGATATGGAGCGTGAAGTGCAGCCGGGGGAAATTATGGTGGCATACGGGCATGTGACACAGGGATATGAATATCCGATGCTGAAATTCATGGTGATCTCTGAAACAGATATTTTTGGCAGACAGAAGAAAAAGAAGCGCAGAAAACTATATGAAGGACAGAAAATCCAAAGTTTCTCCGAATTAAAGGTTGGAGATTATGTGGTACATGAAAATCATGGTCTGGGTATCTATCAGGGAATTGAAAAGATTGAAGTAGATAAGATCACCAAAGATTATATGAAAATTTCTTATGCGGGAGGAAGCAGCCTGTATATTCTTGCAACGCAGCTGGATCTGATCCAGAAGTATGCAGGAGCAGATGCAAAAAAGCCAAAGCTGAACAAGCTGGGAAGTAACCAGTGGACGAAAACAAAGAATCAGGTGCGCGGGGCAGTCAGACAGATTGCCAGGGATCTGGTGGAGCTGTATGCGGCAAGGCAGCAGGAGAATGGATATCAGTATGAACCGGATACGGTCTGGCAGAAGGAATTTGAAGAAATGTTTCCGTTTGAGGAGACCGATGACCAGCTGCAGGCGATCGCCGATACCAAGCAGGACATGGAGAGTAAAAAGATCATGGACCGTCTGATCTGCGGAGACGTCGGATACGGAAAGACGGAAATTGCCATTCGGGCTGCATTTAAGGCGATTCAGGACGGAAAACAGGTGGTATATCTGGTGCCGACAACGATTCTGGCACAGCAGCATTACAACACGTTTGTGCAGAGGATGAAAGAATTTCCGGTGCGTGTGGATTTGCTCTGCCGGTTTCGGACGCTTGCCCAACAGAAGAAGACAACAGAAGATCTGAAAAAAGGACTGGTGGATATTCTGATCGGGACGCATCGTGTTTTGTCAAAGGATGTGGAATTTAAGGATCTGGGACTTTTGATCATAGATGAAGAGCAGCGATTTGGCGTGACACACAAAGAGAAGATTAAAAAACTGCGGGAAAATGTGGATGTACTGACGCTGACTGCAACGCCGATCCCGCGGACACTGCATATGAGTCTGATCGGAATCCGCGATATGAGTGTGCTGGAAGAGGCGCCGATGGATCGGATGCCGATCCAGACATATGTGATGGAGTACAATGATGAGATGGTCCGTGAAGCTATTCAAAGAGAACTGGATCGGGACGGACAGGTGTATTATGTATATAATCGGGCAAGTGATATTGCGGAAATTGCCGATCATGTGCAAAAACTTGTTCCGGACGCGACAGTGGCATTTGCTCACGGGCAGATGGCGGAGCATGAGCTGGAAAATATCATGTATGATTTCATCAACGGAGACATTGATGTGCTGGTGTCAACAACGATTATTGAGACCGGACTGGATATTTCTAATGCCAATACGATGATCATCCATGATGCAGACCGTCTGGGACTTTCTCAAATGTACCAGCTGCGGGGACGTGTGGGAAGATCCAATCGGATGGCGTATGCATTTCTCCTGTACCGAAGAGACAAGCTGCTAAAGGAAGTGGCGGAAAAAAGACTGGCGGCAATCCGGGAGTTTACAGATCTTGGTTCTGGATTTAAAATTGCGATGCGGGATCTGGAAATTCGTGGGGCAGGAAATCTTCTGGGTGCAGAACAGCATGGGCATATGGAGGCTGTCGGATATGATCTGTACTGCAAGATGCTCAATGAAGCGGTAAAACAGTTAAAAGGCGGAACAGAGGAGGAAATCTATACGACCGTGATGGATCTGAATGTGGATGCCTATATCCCGAATTCCTATATTCCGAACGAATATCAGAAGCTGGATATTTACAAGCGGATCGCGGGAATTGAAGATGAGGAAGAGATGGATGATATGCTGGAGGAGCTTATCGACCGGTTCGGGGATGTACCAAGAAAGGTACAGCAGCTTCTTCAGATCGCAGGTCTCAAAGCGCTTGCACATTCAGCTTATGTGACGGCAGTGGAACAAAAAGGAGAAGAATTCCGGTTTACCATGTATGAAAAAGCGAAGGTCAATCCGCAGAAAATTCCTCCGTTGATTCAGAGCTACCGGGGAAATCTGGTGTTTAAGGCGGAGGCAGTGCCGTATTTTGTCTATTATAAAAAGGGCAGAAATAAAAAGGAAAAGGATGAAACGGTTCTGGAGCTTGTGAAAAAGCTCTTAAATGATATAAAGAGCTTGTTAGAGGAGAAAAAAGACGTTATAATGAAATAA
PROTEIN sequence
Length: 1122
MMQAFIAPLAELAEYQEILQKRRKEKGILQIAGCVNSQKTHLMYALGDGFSYKIIVFSSEEKAQKAYEEYRFLDSGVLYYPARDLLFYHADIKGNYLMKQRMEVIRSMVTRQKNQEITVITTMDAFLDGLSPAEEIVSKRIQISSGDTVDFTKLQERLSGLGYVREVQIEGPGQFAVRGGILDIFPLTEEIPVRVELWGDEVDSIRTFDVESQRSIENLKEIEIYPAAELQSQKKQSFLEYFPTEESILFLDEPQRLIEKANEIEEEFQESVRKREEAGLEETQELTVYPVLEILNRINQFYGVAFTALEGKCRGLKIRETDYIQTKGVNPYNNSFEMLTRDLKRLKRNQYRVILLSGSRTRAKRLAEDLRDYDLSSFYSEDMEREVQPGEIMVAYGHVTQGYEYPMLKFMVISETDIFGRQKKKKRRKLYEGQKIQSFSELKVGDYVVHENHGLGIYQGIEKIEVDKITKDYMKISYAGGSSLYILATQLDLIQKYAGADAKKPKLNKLGSNQWTKTKNQVRGAVRQIARDLVELYAARQQENGYQYEPDTVWQKEFEEMFPFEETDDQLQAIADTKQDMESKKIMDRLICGDVGYGKTEIAIRAAFKAIQDGKQVVYLVPTTILAQQHYNTFVQRMKEFPVRVDLLCRFRTLAQQKKTTEDLKKGLVDILIGTHRVLSKDVEFKDLGLLIIDEEQRFGVTHKEKIKKLRENVDVLTLTATPIPRTLHMSLIGIRDMSVLEEAPMDRMPIQTYVMEYNDEMVREAIQRELDRDGQVYYVYNRASDIAEIADHVQKLVPDATVAFAHGQMAEHELENIMYDFINGDIDVLVSTTIIETGLDISNANTMIIHDADRLGLSQMYQLRGRVGRSNRMAYAFLLYRRDKLLKEVAEKRLAAIREFTDLGSGFKIAMRDLEIRGAGNLLGAEQHGHMEAVGYDLYCKMLNEAVKQLKGGTEEEIYTTVMDLNVDAYIPNSYIPNEYQKLDIYKRIAGIEDEEEMDDMLEELIDRFGDVPRKVQQLLQIAGLKALAHSAYVTAVEQKGEEFRFTMYEKAKVNPQKIPPLIQSYRGNLVFKAEAVPYFVYYKKGRNKKEKDETVLELVKKLLNDIKSLLEEKKDVIMK*